Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ARF8
Gene Symbol Synonym OsARF8, OsARF12, ARF12
CGSNL Gene Name AUXIN RESPONSE FACTOR 8
Gene Name Synonym auxin response factor-8, auxin response factor 8, auxin responsive factor 8, auxin response factor-12, auxin response factor 12
Protein Name AUXIN RESPONSE FACTOR 8
Allele osarf12, osarf12T, arf8-1, arf12-1, arf12-2
Chromosome No. 4
Explanation AB071298, Q0J951. the main target of miR167.OsARF12 in Ni et al. 2014, Phule et al. 2018, Zhao et al. 2019, Liu et al. 2019, Wang et al. 2020, Chen et al. 2020, Qin et al. 2020, Li et al. 2020, Zhang et al. 2020, Huang et al. 2021, Wang et al. 2023, Guo et al. 2023, Ma et al. 2023, Zhao et al. 2023. GO:2000012: regulation of auxin polar transport. GO:0140272: exogenous protein binding. GO:1990110: callus formation. TO:0020102: phosphate content. TO:0000919: grain weight. TO:0000975: grain width.
Trait Class Other
Tolerance and resistance - Stress tolerance
Tolerance and resistance - Disease resistance
Vegetative organ - Leaf
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK067150
AK071455
MSU ID LOC_Os04g57610.1
LOC_Os04g57610.3
RAP ID Os04g0671900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wen Y., Wu K., Chai B., Fang Y., Hu P., Tan Y., Wang Y., Wu H., Wang J., Zhu L., Zhang G., Gao Z., Ren D., Zeng D., Shen L., Dong G., Zhang Q., Li Q., Qian Q., Hu J.
BMC Plant Biol. 2023  23(1)  418
nlg1, encoding a mitochondrial membrane protein, controls leaf and grain development in rice.
Wang S., Han S., Zhou X., Zhao C., Guo L., Zhang J., Liu F., Huo Q., Zhao W., Guo Z., Chen X.
Plant Cell 2023  35(6)  2391-2412
Phosphorylation and ubiquitination of OsWRKY31 are integral to OsMKK10-2-mediated defense responses in rice.
Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023  6(1)  457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
Ma F., Zhang F., Zhu Y., Lan D., Yan P., Wang Y., Hu Z., Zhang X., Hu J., Niu F., Liu M., He S., Cui J., Yuan X., Yan Y., Wu S., Cao L., Bian H., Yang J., Li Z., Luo X.
J Integr Plant Biol 2023  65(7)  1753-1766
Auxin signaling module OsSK41-OsIAA10-OsARF regulates grain yield traits in rice.
Zhao Y., Zhang X., Cheng Y., Du X., Teotia S., Miao C., Sun H., Fan G., Tang G., Xue H., Zhao Q., Peng T.
Plant Commun 2023    100604
The miR167-OsARF12 module regulates rice grain filling and grain size downstream of miR159.
Huang G., Hu H., van de Meene A., Zhang J., Dong L., Zheng S., Zhang F., Betts N.S., Liang W., Bennett M.J., Persson S., Zhang D.
Plant Cell 2021  33(9)  3120-3133
AUXIN RESPONSE FACTORS 6 and 17 control the flag leaf angle in rice by regulating secondary cell wall biosynthesis of lamina joints.
Li Y., Li J., Chen Z., Wei Y., Qi Y., Wu C.
Plant Biotechnol. J. 2020   
OsmiR167a-targeted auxin response factors modulate tiller angle via fine-tuning auxin distribution in rice.
Wang B., Zhong Z., Wang X., Han X., Yu D., Wang C., Song W., Zheng X., Chen C., Zhang Y.
Int J Mol Sci 2020  21(7) 
Knockout of the <i>OsNAC006</i> Transcription Factor Causes Drought and Heat Sensitivity in Rice.
Zhang H., Li L., He Y., Qin Q., Chen C., Wei Z., Tan X., Xie K., Zhang R., Hong G., Li J., Li J., Yan C., Yan F., Li Y., Chen J., Sun Z.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(16)  9112-9121
Distinct modes of manipulation of rice auxin response factor OsARF17 by different plant RNA viruses for infection.
Chen Y., Dan Z., Gao F., Chen P., Fan F., Li S.
Plant Physiol. 2020   
Rice GROWTH-REGULATING FACTOR7 Modulates Plant Architecture through Regulating GA and IAA Metabolism.
Qin Q., Li G., Jin L., Huang Y., Wang Y., Wei C., Xu Z., Yang Z., Wang H., Li Y.
PLoS Pathog. 2020  16(12)  e1009118
Auxin response factors (ARFs) differentially regulate rice antiviral immune response against rice dwarf virus.
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019  12(1)  92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
Zhao Z.X., Feng Q., Cao X.L., Zhu Y., Wang H., Chandran V., Fan J., Zhao J.Q., Pu M., Li Y., Wang W.M.
J Integr Plant Biol 2019   
Osa-miR167d facilitates infection of Magnaporthe oryzae in rice.
Phule A.S., Barbadikar K.M., Madhav M.S., Senguttuvel P., Babu MBBP., Ananda Kumar P.
3 Biotech 2018  8(9)  383
Genes encoding membrane proteins showed stable expression in rice under aerobic condition: novel set of reference genes for expression studies.
Wang S., Zhang S., Sun C., Xu Y., Chen Y., Yu C., Qian Q., Jiang D.A., Qi Y.
New Phytol. 2014  201(1)  91-103
Auxin response factor (OsARF12), a novel regulator for phosphate homeostasis in rice (Oryza sativa).
Ni J.a b, Zhu Z.b c, Wang G.c, Shen Y.a, Zhang Y.a, Wu P.b
PLoS ONE 2014  9 
Intragenic suppressor of Osiaa23 revealed a conserved Tryptophan residue crucial for protein-protein interactions
Shen W.J., Ruan X.L., Li X.S., Zhao Q., Li H.P.
Arch. Virol. 2012  157(8)  1531-9
RNA silencing suppressor Pns11 of rice gall dwarf virus induces virus-like symptoms in transgenic rice.
Qi Y., Wang S., Shen C., Zhang S., Chen Y., Xu Y., Liu Y., Wu Y., Jiang D.
New Phytol. 2012  193(1)  109-20
OsARF12, a transcription activator on auxin response gene, regulates root elongation and affects iron accumulation in rice (Oryza sativa).
Shen C,Wang S,Bai Y,Wu Y,Zhang S,Chen M,Guilfoyle TJ,Wu P,Qi Y
J. Exp. Bot. 2010  61(14)  3971-81
Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.).
Wang D., Pei K., Fu Y., Sun Z., Li S., Liu H., Tang K., Han B., Tao Y.
Gene 2007  394(1-2)  13-24
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
Ji Hyun Yang, So Jeong Han, Eun Kyung Yoon, Woo Sung Lee
Nucleic Acids Res. 2006  34(6)  1892-9
'Evidence of an auxin signal pathway, MicroRNA167-ARF8-GH3, and its response to exogenous auxin in cultured rice cells'.
Y Sato, A Nishimura, M Ito, M Ashikari, H Y Hirano, M Matsuoka
Genes Genet. Syst. 2001  76(6)  373-80
Auxin response factor family in rice.
TextPresso Search Search textpresso for ARF8 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to brassinosteroid stimulus( GO:0009741 )
brassinosteroid mediated signaling( GO:0009742 )
seed development( GO:0048316 )
regulation of cell division( GO:0051302 )
response to auxin stimulus( GO:0009733 )
gravitropism( GO:0009630 )
auxin polar transport( GO:0009926 )
regulation of defense response to virus( GO:0050688 )
defense response to virus( GO:0051607 )
DNA binding( GO:0003677 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
auxin mediated signaling pathway( GO:0009734 )
nucleus( GO:0005634 )
response to oxygen levels( GO:0070482 )
defense response to fungus( GO:0050832 )
Trait Ontology plant growth hormone sensitivity( TO:0000401 )
oxygen sensitivity( TO:0000015 )
blast disease( TO:0000074 )
leaf angle( TO:0000206 )
viral disease resistance( TO:0000148 )
tiller angle( TO:0000567 )
gravity response trait( TO:0002693 )
auxin sensitivity( TO:0000163 )
callus induction( TO:0000428 )
grain size( TO:0000397 )
grain weight( TO:0000590 )
grain yield( TO:0000396 )
1000-seed weight( TO:0000382 )
inflorescence branching( TO:0000050 )
grain length( TO:0000734 )
grain thickness( TO:0000399 )
brassinosteroid sensitivity( TO:0002677 )
seed development trait( TO:0000653 )
Plant Ontology leaf lamina( PO:0020039 )
leaf( PO:0025034 )
root( PO:0009005 )
seed development stage( PO:0001170 )
Related Strains
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Phenotype images
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Last updated
Dec 15, 2023


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