Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SIP2
Gene Symbol Synonym OsSIP2, OsFIP, FIP, OsFIP37, FIP37
CGSNL Gene Name SKIP INTERACTING PROTEIN 2
Gene Name Synonym SKIP interacting protein 2, SKIPa-interacting protein 2, SKIPa-interacting protein 2, FKBP12 INTERACTING PROTEIN 37
Protein Name SKIP INTERACTING PROTEIN 2
Allele fip
Chromosome No. 6
Explanation EU368692. ortholog of WTAP. N6-methyladenosine (m6A) methylation regulatory gene, a component of the writer (RNA methyltransferase) complex. GO:0036396: RNA N6-methyladenosine methyltransferase complex.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Seed - Morphological traits - Embryo
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Expression
Sequence/Locus
cDNA Accession No. AK242820
MSU ID LOC_Os06g27970.1
RAP ID Os06g0474200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Fan X., Zhang Y., Gu P., Naz M.
Plants (Basel) 2025  14(13) 
Epitranscriptomic Control of drought tolerance in Rice: The Role of RNA Methylation.
Zhang F., Yu-Chan Zhang, Jian-You Liao, Yu Y., Yan-Fei Zhou, Yan-Zhao Feng, Yu-Wei Yang, Meng-Qi Lei, Bai M., Wu H., Yue-Qin Chen
PLoS Genet. 2019  15(5)  e1008120
The subunit of RNA N6-methyladenosine methyltransferase OsFIP regulates early degeneration of microspores in rice.
Hou X,Xie K,Yao J,Qi Z,Xiong L
Proc. Natl. Acad. Sci. U.S.A. 2009  106  6410-5
A homolog of human ski-interacting protein in rice positively regulates cell viability and stress tolerance.
DB Reference
Gramene ID -
Ontologies
Gene Ontology RNA methylation( GO:0001510 )
response to wounding( GO:0009611 )
response to desiccation( GO:0009269 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to cold( GO:0009409 )
defense response to fungus( GO:0050832 )
defense response to bacterium( GO:0042742 )
microsporogenesis( GO:0009556 )
gamete generation( GO:0007276 )
plant-type spore development( GO:0048236 )
embryonic development( GO:0009790 )
plasmodesma( GO:0009506 )
RNA processing( GO:0006396 )
cytoskeleton( GO:0005856 )
nucleus( GO:0005634 )
mitotic cell cycle( GO:0000278 )
regulation of nuclear mRNA splicing, via spliceosome( GO:0048024 )
Trait Ontology sterility related trait( TO:0000485 )
tiller number( TO:0000346 )
panicle length( TO:0000040 )
anther length( TO:0000531 )
seed set percent( TO:0000455 )
spikelet fertility( TO:0000180 )
seed number( TO:0000445 )
embryo development trait( TO:0000620 )
sporogenesis( TO:0000727 )
male sterility( TO:0000437 )
bacterial blight disease resistance( TO:0000175 )
blast disease( TO:0000074 )
fungal disease resistance( TO:0000439 )
bacterial disease resistance( TO:0000315 )
cold tolerance( TO:0000303 )
salt sensitivity( TO:0000429 )
drought tolerance( TO:0000276 )
Plant Ontology plant embryo stage( PO:0007631 )
microspore( PO:0020048 )
tapetum cell( PO:0025543 )
seed( PO:0009010 )
Related Strains
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Phenotype images
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Last updated
Oct 13, 2025

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