Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsNDPK1, NDK, rNDK, NDK1, NDKR, NDK-1
CGSNL Gene Name NUCLEOSIDE DIPHOSPHATE KINASE 1
Gene Name Synonym nucleoside diphosphate kinase 1, Nucleoside diphosphate kinase, 16.8 kDa NDK, NDP kinase
Protein Name NUCLEOSIDE DIPHOSPHATE KINASE 1
Allele
Chromosome No. 7
Explanation LOC_Os07g30970. Q07661. D16292, D10431.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK121796
MSU ID LOC_Os07g30970.1
LOC_Os07g30970.2
RAP ID Os07g0492000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Zhou K., Xia J., Wang Y., Ma T., Li Z.
Genet. Mol. Biol. 2017    0
A Young Seedling stripe2 phenotype in rice is caused by mutation of a chloroplast-localized nucleoside diphosphate kinase 2 required for chloroplast biogenesis.
Kihara A., Saburi W., Wakuta S., Kim M.H., Hamada S., Ito H., Imai R., Matsui H.
Biosci. Biotechnol. Biochem. 2011  75(9)  1740-5
Physiological and biochemical characterization of three Nucleoside diphosphate kinase isozymes from rice (Oryza sativa L.).
Jen-Yen Huang, Chang T., Chia-Yu Chang, Chun-Jung Chen
J. Struct. Biol. 2005  150(3)  309-18
Crystal structure of Nucleoside diphosphate kinase required for coleoptile elongation in rice (Oryza sativa L.).
L Pan, M Kawai, A Yano, H Uchimiya
Plant Physiol. 2000  122(2)  447-52
Nucleoside diphosphate kinase required for coleoptile elongation in rice.
A Yano, M Umeda, H Uchimiya
Plant Mol. Biol. 1995  27(5)  1053-8
Expression of functional proteins of cDNA encoding rice nucleoside diphosphate kinase (NDK) in Escherichia coli and organ-related alteration of NDK activities during rice seed germination (Oryza sativa L.).
Yano,A., Shimazaki,T., Kato,A., Umeda,M. and Uchimiya,H.
Plant Mol. Biol. 1993  23(5)  1087-1090
Molecular cloning and nucleotide sequence cDNA encoding nucleoside diphosphate kinase of rice (Oryza sativa L.).
Uchimiya,H., Kidou,S., Shimazaki,T., Aotsuka,S., Takamatsu,S., Nishi,R., Hashimoto,H., Matsubayashi,Y., Kidou,N., Umeda,M. and Kato,A.
Plant J. 1992  2(6)  1005-1009
Random sequencing og cDNA librariesreveals a variety of expressed genes in cultured cells of rice (Oryza sativa L.)
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DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleoside diphosphate kinase activity( GO:0004550 )
ATP binding( GO:0005524 )
GTP biosynthetic process( GO:0006183 )
UTP biosynthetic process( GO:0006228 )
CTP biosynthetic process( GO:0006241 )
metal ion binding( GO:0046872 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Dec 28, 2017


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