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Basic Information
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CGSNL Gene Symbol
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FBOX206
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Gene Symbol Synonym
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OsAFB2, ABF2, OsAFB2-1, OsAFB2-2, OsFbox206, Os_F0492, OsTIR1, TIR1, OsFBL16, FBL16
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CGSNL Gene Name
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F-BOX PROTEIN 206
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Gene Name Synonym
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Auxin signaling f-box 2, Auxin F-box protein 2, F-box protein 206, transport inhibitor response 1, F-box-type E3 ubiquitin ligase L16
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Protein Name
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F-BOX PROTEIN 206
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Allele
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Osafb2, afb2
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Chromosome No.
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4
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Explanation
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Q7XVM8. a miR393 target gene. Os_F0492 in Hua et al. 2011. auxin receptor. GO:1990110: callus formation.
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Trait Class
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Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Vegetative organ - Root
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - panicle
Character as QTL - Plant growth activity
Reproductive organ - Spikelet, flower, glume, awn
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100862
AK072338
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MSU ID
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LOC_Os04g32460.1
LOC_Os04g32460.2
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RAP ID
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Os04g0395600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Ma F., Zhang F., Zhu Y., Lan D., Yan P., Wang Y., Hu Z., Zhang X., Hu J., Niu F., Liu M., He S., Cui J., Yuan X., Yan Y., Wu S., Cao L., Bian H., Yang J., Li Z., Luo X.
J Integr Plant Biol 2023 65(7) 1753-1766
Auxin signaling module OsSK41-OsIAA10-OsARF regulates grain yield traits in rice.
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Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023 6(1) 457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154
An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Liu C.C., Liu Y.N., Cheng J.F., Guo R., Tian L., Wang B.
Front Plant Sci 2022 13 853435
Dual Roles of <i>OsGH3.2</i> in Modulating Rice Root Morphology and Affecting Arbuscular Mycorrhizal Symbiosis.
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Watson A.T., Hassell-Hart S., Spencer J., Carr A.M.
Genes (Basel) 2021 12(6)
Rice (<i>Oryza sativa</i>) TIR1 and 5'adamantyl-IAA Significantly Improve the Auxin-Inducible Degron System in <i>Schizosaccharomyces pombe</i>.
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Guo F., Huang Y., Qi P., Lian G., Hu X., Han N., Wang J., Zhu M., Qian Q., Bian H.
New Phytol. 2020
Functional analysis of auxin receptor OsTIR1/OsAFB family members in rice grain yield, tillering, plant height, root system, germination, and auxinic herbicide resistance.
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Chen H., Ma B., Zhou Y., He S.J., Tang S.Y., Lu X., Xie Q., Chen S.Y., Zhang J.S.
Proc. Natl. Acad. Sci. U.S.A. 2018 115(17) 4513-4518
E3 Ubiquitin ligase SOR1 regulates ethylene response in rice root by modulating stability of Aux/IAA protein.
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Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017 68(17) 4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
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Li X., Xia K., Liang Z., Chen K., Gao C., Zhang M.
Sci Rep 2016 6 32158
MicroRNA393 is involved in nitrogen-promoted rice tillering through regulation of auxin signal transduction in axillary buds.
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Bian H., Xie Y., Guo F., Han N., Ma S., Zeng Z., Wang J., Yang Y., Zhu M.
New Phytol. 2012 196(1) 149-61.
Distinctive expression patterns and roles of the miRNA393/TIR1 homolog module in regulating flag leaf inclination and primary and crown root growth in rice (Oryza sativa).
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Xia K., Wang R., Ou X., Fang Z., Tian C., Duan J., Wang Y., Zhang M.
PLoS ONE 2012 7(1) e30039
OsTIR1 and OsAFB2 downregulation via OsmiR393 overexpression leads to more tillers, early flowering and less tolerance to salt and drought in rice.
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Hua Z., Zou C., Shin-Han Shiu, Richard D Vierstra
PLoS ONE 2011 6(1) e16219
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift.
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Xu G., Ma H., Nei M., Kong H.
Proc. Natl. Acad. Sci. U.S.A. 2009 106(3) 835-40
Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification.
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Yang X., Udaya C Kalluri, Jawdy S., Lee E Gunter, Yin T., Timothy J Tschaplinski, David J Weston, Ranjan P., Gerald A Tuskan
Plant Physiol. 2008 148(3) 1189-200
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants.
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Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP.
Plant Physiol. 2007 143(4) 1467-1483
F-Box Proteins in Rice. Genome-Wide Analysis, Classification, Temporal and Spatial Gene Expression during Panicle and Seed Development, and Regulation by Light and Abiotic Stress.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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auxin binding( GO:0010011 )
SCF ubiquitin ligase complex( GO:0019005 )
auxin mediated signaling pathway( GO:0009734 )
inositol hexakisphosphate binding( GO:0000822 )
nucleus( GO:0005634 )
regulation of ethylene mediated signaling pathway( GO:0010104 )
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Trait Ontology
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auxin sensitivity( TO:0000163 )
root length( TO:0000227 )
ethylene sensitivity( TO:0000173 )
callus induction( TO:0000428 )
grain length( TO:0000734 )
grain weight( TO:0000590 )
1000-seed weight( TO:0000382 )
growth and development trait( TO:0000357 )
seed length to width ratio( TO:0000411 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
spikelet number( TO:0000456 )
grain yield per plant( TO:0000449 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Sep 19, 2023
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Update info.