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Basic Information
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CGSNL Gene Symbol
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NCED1
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Gene Symbol Synonym
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OSNCED1, OsNCED-1, OsNCED3, OsNced3, NCED3
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CGSNL Gene Name
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9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
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Gene Name Synonym
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9-cis-epoxycarotenoid dioxygenase 1, 9-Cis-Epoxycarotenoid Dioxygenase 3
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Protein Name
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9-CIS-EPOXYCAROTENOID DIOXYGENASE 1
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Allele
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Chromosome No.
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3
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Explanation
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AC120531. AY838899. OsNCED3 in Welsch et al. 2008, Liu et al. 2012, Xu et al. 2013, Teng et al. 2014 , Chen et al. 2014, Liang et al. 2014, Shi et al. 2015, Du et al. 2015, Li et al. 2015, Zhao et al. 2016, Hong et al. 2016, Mao et al. 2017, He et al. 2018, Liu et al. 2018, Liu et al. 2019, Chen et al. 2019, Gong et al. 2019, Kim et al. 2019, Cao et al. 2020, Suriyasak et al. 2020, Dong et al. 2021, Verma et al. 2019, Santosh et al. 2021, Li et al. 2021, Yu et al. 2021, Da Costa et al. 2021, Yang et al. 2022, He et al. 2022, Yi et al. 2022, Zhou et al. 2022, Wen et al. 2022, Shi et al. 2020.
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Trait Class
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Biochemical character
Seed - Physiological traits - Dormancy
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Germination
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Expression
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Sequence/Locus
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cDNA Accession No.
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AY838899
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MSU ID
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LOC_Os03g44380.1
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RAP ID
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Os03g0645900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
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RAP-DB
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IRGSP 1.0
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Build5
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Related IDs List (
IRGSP 1.0
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Build5
)
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Yang B., Chen M., Zhan C., Liu K., Cheng Y., Xie T., Zhu P., He Y., Zeng P., Tang H., Tsugama D., Chen S., Zhang H., Cheng J.
J. Exp. Bot. 2022
Identification of OsPK5 involved in rice glycolytic metabolism and GA/ABA balance for improving seed germination via GWAS.
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Wen D., Bao L., Huang X., Qian X., Chen E., Shen B.
Int J Mol Sci 2022 23(18)
<i>OsABT</i> Is Involved in Abscisic Acid Signaling Pathway and salt tolerance of Roots at the Rice Seedling Stage.
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Zhou Z., Fan J., Zhang J., Yang Y., Zhang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Xu Z., Li L.
Plants (Basel) 2022 11(13)
<i>OsMLP423</i> Is a Positive Regulator of Tolerance to Drought and Salt Stresses in Rice.
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Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022 13 887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
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He Y., Chen S., Liu K., Chen Y., Cheng Y., Zeng P., Zhu P., Xie T., Chen S., Zhang H., Cheng J.
Plant Biotechnol. J. 2022 20(7) 1346-1362
OsHIPL1, a hedgehog-interacting protein-like 1 protein, increases seed vigour in rice.
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Yi Y., Peng Y., Song T., Lu S., Teng Z., Zheng Q., Zhao F., Meng S., Liu B., Peng Y., Chen G., Zhang J., Ye N.
Plants (Basel) 2022 11(6)
NLP2-NR Module Associated NO Is Involved in Regulating Seed Germination in Rice under Salt Stress.
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Dong J., Zhou L., Feng A., Zhang S., Fu H., Chen L., Zhao J., Yang T., Yang W., Ma Y., Wang J., Zhu X., Liu Q., Liu B.
Rice (N Y) 2021 14(1) 51
The OsOXO2, OsOXO3 and OsOXO4 Positively Regulate Panicle Blast Resistance in Rice.
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Li X., Yu B., Wu Q., Min Q., Zeng R., Xie Z., Huang J.
PLoS Genet. 2021 17(8) e1009699
OsMADS23 phosphorylated by SAPK9 confers drought and salt tolerance by regulating ABA biosynthesis in rice.
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Da Costa MVJ., Ramegowda V., Sreeman S., Nataraja K.N.
Int J Mol Sci 2021 22(21)
Targeted Phytohormone Profiling Identifies Potential Regulators of spikelet sterility in Rice under Combined Drought and Heat Stress.
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Yu J., Mao C., Zhong Q., Yao X., Li P., Liu C., Ming F.
Front Plant Sci 2021 12 699303
OsNAC2 Is Involved in Multiple Hormonal Pathways to Mediate Germination of Rice Seeds and Establishment of Seedling.
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Santosh Kumar VV., Yadav S.K., Verma R.K., Shrivastava S., Ghimire O., Pushkar S., Rao M.V., Senthil Kumar T., Chinnusamy V.
J. Exp. Bot. 2021 72(4) 1411-1431
The abscisic acid receptor OsPYL6 confers drought tolerance to indica rice through dehydration avoidance and tolerance mechanisms.
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Suriyasak C., Oyama Y., Ishida T., Mashiguchi K., Yamaguchi S., Hamaoka N., Iwaya-Inoue M., Ishibashi Y.
Sci Rep 2020 10(1) 17378
Mechanism of delayed seed germination caused by high temperature during grain filling in rice (Oryza sativa L.).
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Shi Y., Chang Y.L., Wu H.T., Shalmani A., Liu W.T., Li W.Q., Xu J.W., Chen K.M.
Plant Cell Rep. 2020 39(12) 1767-1784
OsRbohB-mediated ROS production plays a crucial role in drought stress tolerance of rice.
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Cao X., Wu L., Wu M., Zhu C., Jin Q., Zhang J.
BMC Plant Biol. 2020 20(1) 198
Abscisic acid mediated proline biosynthesis and antioxidant ability in roots of two different rice genotypes under hypoxic stress.
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Chen B.X., Peng Y.X., Gao J.D., Zhang Q., Liu Q.J., Fu H., Liu J.
Front Plant Sci 2019 10 828
Coumarin-Induced Delay of Rice Seed Germination Is Mediated by Suppression of Abscisic Acid Catabolism and Reactive Oxygen Species Production.
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Verma R.K., Santosh Kumar VV., Yadav S.K., Pushkar S., Rao M.V., Chinnusamy V.
Front Plant Sci 2019 10 1488
Overexpression of ABA Receptor <i>PYL10</i> Gene Confers Drought and Cold Tolerance to Indica Rice.
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Jiang D., Zhou L., Chen W., Ye N., Xia J., Zhuang C.
Rice (N Y) 2019 12(1) 76
Overexpression of a microRNA-targeted NAC transcription factor improves drought and salt tolerance in Rice via ABA-mediated pathways.
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Kim T., Kang K., Kim S.H., An G., Paek N.C.
Int J Mol Sci 2019 20(18)
OsWRKY5 Promotes Rice leaf senescence via Senescence-Associated NAC and Abscisic Acid Biosynthesis Pathway.
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Gong P., Luo Y., Huang F., Chen Y., Zhao C., Wu X., Li K., Yang X., Cheng F., Xiang X., Wu C., Pan G.
Plant Mol. Biol. 2019 100(1-2) 133-149
Disruption of a Upf1-like helicase-encoding gene OsPLS2 triggers light-dependent premature leaf senescence in rice.
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Liu C., Schläppi MR., Mao B., Wang W., Wang A., Chu C.
Plant Biotechnol. J. 2019
The bZIP73 transcription factor controls rice cold tolerance at the reproductive stage.
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Yao L., Cheng X., Gu Z., Huang W., Li S., Wang L., Wang Y.F., Xu P., Ma H., Ge X.
Plant Cell 2018 30(6) 1258-1276
The AWPM-19 Family Protein OsPM1 Mediates Abscisic Acid Influx and Drought Response in Rice.
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He Y., Li L., Zhang Z., Wu J.L.
Int J Mol Sci 2018 19(1)
Identification and Comparative Analysis of Premature Senescence Leaf Mutants in Rice (Oryza sativa L.).
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Huang L., Zhang M., Jia J., Zhao X., Huang X., Ji E., Ni L., Jiang M.
Plant Cell Physiol. 2018 59(5) 916-929
An Atypical Late Embryogenesis Abundant Protein OsLEA5 Plays a Positive Role in ABA-Induced Antioxidant Defense in Oryza sativa L.
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Liu C., Ou S., Mao B., Tang J., Wang W., Wang H., Cao S., Schläppi MR., Zhao B., Xiao G., Wang X., Chu C.
Nat Commun 2018 9(1) 3302
Early selection of bZIP73 facilitated adaptation of japonica rice to cold climates.
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Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017 174(3) 1747-1763
A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
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Bollinedi H., S GK., Prabhu K.V., Singh N.K., Mishra S., Khurana J.P., Singh A.K.
PLoS ONE 2017 12(1) e0169600
Molecular and Functional Characterization of GR2-R1 Event Based Backcross Derived Lines of Golden Rice in the Genetic Background of a Mega Rice Variety Swarna.
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Zhao J., Li M., Gu D., Liu X., Zhang J., Wu K., Zhang X., Teixeira da Silva JA., Duan J.
Biochem. Biophys. Res. Commun. 2016 470(2) 439-44
Involvement of rice histone deacetylase HDA705 in seed germination and in response to ABA and abiotic stresses.
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Hong Y., Zhang H., Huang L., Li D., Song F.
Front Plant Sci 2016 7 4
Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and salt tolerance in Rice.
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Li S.B., Xu S.R., Zhang R.N., Liu Y., Zhou R.C.
J. Microbiol. Biotechnol. 2015
The antibiosis action and rice induced resistance, mediated by a lipopeptide from Bacillus amyloliquefaciens B014, in controlling rice disease caused by Xanthomonas oryzae pv. Oryzae.
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Shi L., Guo M., Ye N., Liu Y., Liu R., Xia Y., Cui S., Zhang J.
Plant Cell Physiol. 2015 56(5) 951-64
Reduced ABA Accumulation in the root system is Caused by ABA Exudation in Upland Rice (Oryza sativa L. var. Gaoshan1) and this Enhanced Drought Adaptation.
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Teng K., Li J., Liu L., Han Y., Du Y., Zhang J., Sun H., Zhao Q.
Acta Physiologiae Plantarum 2014 36 2219-2227
Exogenous ABA induces drought tolerance in upland rice: The role of chloroplast and ABA biosynthesis-related gene expression on photosystem II during PEG stress
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Du H., Chang Y., Huang F., Xiong L.
J Integr Plant Biol 2014
gid1 modulates stomatal response and submergence tolerance involving ABA and GA signaling in rice.
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Zeng D.E.a b, Hou P.a, Xiao F.c, Liu Y.a d
Journal of Plant Biology 2014 57 357-365
Overexpressing a novel RING-H2 finger protein gene, OsRHP1, enhances drought and salt tolerance in rice (Oryza sativa L.)
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Chen M., Zhao Y., Zhuo C., Lu S., Guo Z.
Plant Biotechnol. J. 2014
Overexpression of a NF-YC transcription factor from bermudagrass confers tolerance to drought and salinity in transgenic rice.
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Liang C., Wang Y., Zhu Y., Tang J., Hu B., Liu L., Ou S., Wu H., Sun X., Chu J., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2014 111(27) 10013-8
OsNAP connects abscisic acid and leaf senescence by fine-tuning abscisic acid biosynthesis and directly targeting senescence-associated genes in rice.
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Xu J., Audenaert K., Hofte M., De Vleesschauwer D.
PLoS ONE 2013 8(6) e67413
Abscisic Acid Promotes Susceptibility to the Rice Leaf Blight Pathogen Xanthomonas oryzae pv oryzae by Suppressing Salicylic Acid-Mediated Defenses.
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Fukumoto T., Kano A., Ohtani K., Inoue M., Yoshihara A., Izumori K., Tajima S., Shigematsu Y., Tanaka K., Ohkouchi T., Ishida Y., Nishizawa Y., Tada Y., Ichimura K., Gomi K., Yoo S.D., Sheen J., Akimitsu K.
Planta 2013 237(5) 1379-91
Phosphorylation of D-allose by hexokinase involved in regulation of OsABF1 expression for growth inhibition in Oryza sativa L.
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Song S., Dai X., Zhang W.H.
J. Exp. Bot. 2012 63(15) 5559-68
A rice F-box gene, OsFbx352, is involved in glucose-delayed seed germination in rice.
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Liu H., Li X., Xiao J., Wang S.
Plant Methods 2012 8(1) 2
A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction.
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Saeng-ngam S., Takpirom W., Buaboocha T., Chadchawan S.
Journal of Plant Biology 2012 55 198-208
The role of the OsCam1-1 salt stress sensor in ABA accumulation and salt tolerance in rice
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Liu D., Chen X., Liu J., Ye J., Guo Z.
J. Exp. Bot. 2012 63 3899-3912
The rice ERF transcription factor OsERF922 negatively regulates resistance to Magnaporthe oryzae and salt tolerance.
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Ji X. , Dong B. , Shiran B. , Talbot M.J. , Edlington J.E. , Hughes T. , White R.G. , Gubler F. , Dolferus R.
Plant Physiol. 2011 156(2) 647-62
Control of abscisic Acid catabolism and abscisic Acid homeostasis is important for reproductive stage stress tolerance in cereals.
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Mahmoud W Yaish, Ashraf El-Kereamy, Zhu T., Perrin H Beatty, Allen G Good, Yong-Mei Bi, Steven J Rothstein
PLoS Genet. 2010 6(9) e1001098
The APETALA-2-like transcription factor OsAP2-39 controls key interactions between abscisic acid and gibberellin in rice.
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Zhu G,Ye N,Zhang J
Plant Cell Physiol. 2009 50 644-51
Glucose-induced delay of seed germination in rice is mediated by the suppression of ABA catabolism rather than an enhancement of ABA biosynthesis.
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Welsch,R., Wust,F., Bar,C., Al-Babili,S. and Beyer,P.
Plant Physiol. 2008 147(1) 367-380
A third phytoene synthase is devoted to abiotic stress-induced abscisic acid formation in rice and defines functional diversification of phytoene synthase genes
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Oliver SN,Dennis ES,Dolferus R
Plant Cell Physiol. 2007 48 1319-30
ABA regulates apoplastic sugar transport and is a potential signal for cold-induced pollen sterility in rice.
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TextPresso Search
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Search textpresso for NCED1
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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Ontologies
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Gene Ontology
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response to salt stress( GO:0009651 )
response to heat( GO:0009408 )
response to molecule of bacterial origin( GO:0002237 )
abscisic acid biosynthetic process( GO:0009688 )
9-cis-epoxycarotenoid dioxygenase activity( GO:0045549 )
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen( GO:0016702 )
seed germination( GO:0009845 )
response to cold( GO:0009409 )
response to hypoxia( GO:0001666 )
defense response to bacterium( GO:0042742 )
response to abscisic acid stimulus( GO:0009737 )
response to osmotic stress( GO:0006970 )
response to water deprivation( GO:0009414 )
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Trait Ontology
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abscisic acid sensitivity( TO:0000615 )
osmotic response sensitivity( TO:0000095 )
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
abscisic acid content( TO:0002667 )
bacterial blight disease resistance( TO:0000175 )
oxygen sensitivity( TO:0000015 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
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Related Strains
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Phenotype images
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Last updated
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Feb 14, 2023
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