Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol 4CL4
Gene Symbol Synonym Os4CL4
CGSNL Gene Name 4-COUMARATE:COENZYME A LIGASE 4
Gene Name Synonym 4-coumarate:coenzyme A ligase 4
Protein Name 4-COUMARATE:COENZYME A LIGASE 4
Allele
Chromosome No. 6
Explanation Q67W82. EC 6.2.1.12 Os4CL4 participates in defense against wounding. 4CL in Zhang et al. 2009.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK068985
MSU ID LOC_Os06g44620.1
LOC_Os06g44620.2
RAP ID Os06g0656500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu X.L., Wang L., Wang X.W., Yan Y., Yang X.L., Xie M.Y., Hu Z., Shen X., Ai H., Lin H.H., Xu G.H., Yang J., Sun S.B.
Plant J. 2020  102(1)  53-67
Mutation of the chloroplast-localized phosphate transporter OsPHT2;1 reduces flavonoid accumulation and UV tolerance in rice.
Li W., Wang K., Chern M., Liu Y., Zhu Z., Liu J., Zhu X., Yin J., Ran L., Xiong J., He K., Xu L., He M., Wang J., Liu J., Bi Y., Qing H., Li M., Hu K., Song L., Wang L., Qi T., Hou Q., Chen W., Li Y., Wang W., Chen X.
New Phytol. 2020  226(6)  1850-1863
Sclerenchyma cell thickening through enhanced lignification induced by OsMYB30 prevents fungal penetration of rice leaves.
Wang J., Islam F., Li L., Long M., Yang C., Jin X., Ali B., Mao B., Zhou W.
Int J Mol Sci 2017  18(9) 
Complementary RNA-Sequencing Based Transcriptomics and iTRAQ Proteomics Reveal the Mechanism of the Alleviation of Quinclorac Stress by Salicylic Acid in Oryza sativa ssp. japonica.
Sun H., Li Y., Feng S., Zou W., Guo K., Fan C., Si S., Peng L.
Biochem. Biophys. Res. Commun. 2013  430(3)  1151-6
Analysis of five rice 4-coumarate:coenzyme A ligase enzyme activity and stress response for potential roles in lignin and flavonoid biosynthesis in rice.
Zhang X., Rerksiri W., Liu A., Zhou X., Xiong H., Xiang J., Chen X., Xiong X.
Gene 2013  530(2)  185-92
Transcriptome profile reveals heat response mechanism at molecular and metabolic levels in rice flag leaf.
Gui J., Shen J., Li L.
Plant Physiol. 2011  157(2)  574-86
Functional characterization of evolutionarily divergent 4-coumarate:coenzyme a ligases in rice.
Zhang GH,Xu Q,Zhu XD,Qian Q,Xue HW
Plant Cell 2009  21  719-35
SHALLOT-LIKE1 is a KANADI transcription factor that modulates rice leaf rolling by regulating leaf abaxial cell development.
Clarice de Azevedo Souza, Barbazuk B., Steven G Ralph, Bohlmann J., Hamberger B., Carl J Douglas
New Phytol. 2008  179(4)  987-1003
Genome-wide analysis of a land plant-specific acyl:coenzyme A synthetase (ACS) gene family in Arabidopsis, poplar, rice and Physcomitrella.
DB Reference
Gramene ID -
Ontologies
Gene Ontology ATP binding( GO:0005524 )
phenylpropanoid metabolic process( GO:0009698 )
response to heat( GO:0009408 )
response to herbicide( GO:0009635 )
response to salicylic acid stimulus( GO:0009751 )
4-coumarate-CoA ligase activity( GO:0016207 )
Trait Ontology herbicide sensitivity( TO:0000058 )
temperature response trait( TO:0000432 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 21, 2022

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