Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol ATG18A
Gene Symbol Synonym OsATG18a, OsWD40-56
CGSNL Gene Name AUTOPHAGY ASSOCIATED GENE 18A
Gene Name Synonym autophagy 18a
Protein Name
Allele
Chromosome No. 2
Explanation AY445625. LOC_Os02g54910.
Trait Class
Expression
Sequence/Locus
cDNA Accession No. AK099697
AK066282
MSU ID LOC_Os02g54910.1
RAP ID Os02g0791800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012  13(1)  100
Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011  18(5)  363-77
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
TextPresso Search Search textpresso for ATG18A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology cytosol( GO:0005829 )
macroautophagy( GO:0016236 )
PAS complex( GO:0070772 )
phosphatidylinositol-3,5-bisphosphate binding( GO:0080025 )
autophagic vacuole formation( GO:0000045 )
autophagic vacuole membrane( GO:0000421 )
pre-autophagosomal structure membrane( GO:0034045 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Jun 23, 2015


/rice/oryzabase