Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ATG7
Gene Symbol Synonym OsATG7, Atg7
CGSNL Gene Name AUTOPHAGY ASSOCIATED GENE 7
Gene Name Synonym autophagy 7, OsAuTophaGy7, autophagy-related 7, AUTOPHAGY RELATED7
Protein Name
Allele Osatg7, Osatg7-1, Osatg7-2
Chromosome No. 1
Explanation TO:0020093: nitrogen content. GO:2000881: regulation of starch catabolic process.
Trait Class Seed - Morphological traits - Grain shape
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Expression
Sequence/Locus
cDNA Accession No. AK067422
AK121767
MSU ID LOC_Os01g42850.1
LOC_Os01g42850.2
RAP ID Os01g0614900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Hanamata S., Sawada J., Ono S., Ogawa K., Fukunaga T., Nonomura K.I., Kimura S., Kurusu T., Kuchitsu K.
Front Plant Sci 2020  11  172
Impact of Autophagy on Gene Expression and Tapetal Programmed Cell Death During pollen Development in Rice.
Sera Y., Hanamata S., Sakamoto S., Ono S., Kaneko K., Mitsui Y., Koyano T., Fujita N., Sasou A., Masumura T., Saji H., Nonomura K.I., Mitsuda N., Mitsui T., Kurusu T., Kuchitsu K.
Sci Rep 2019  9(1)  18544
Essential roles of autophagy in metabolic regulation in endosperm development during rice seed maturation.
Kurusu T., Koyano T., Kitahata N., Kojima M., Hanamata S., Sakakibara H., Kuchitsu K.
Plant Signal Behav 2017  12(9)  e1365211
Autophagy-mediated regulation of phytohormone metabolism during rice anther development.
Izumi M., Hidema J., Wada S., Kondo E., Kurusu T., Kuchitsu K., Makino A., Ishida H.
Plant Physiol. 2015  167(4)  1307-20
Establishment of Monitoring Methods for Autophagy in Rice Reveals Autophagic Recycling of Chloroplasts and Root Plastids during Energy Limitation.
Wada S., Hayashida Y., Izumi M., Kurusu T., Hanamata S., Kanno K., Kojima S., Yamaya T., Kuchitsu K., Makino A., Ishida H.
Plant Physiol. 2015  168(1)  60-73
Autophagy supports biomass production and nitrogen use efficiency at the vegetative stage in rice.
Kurusu T., Koyano T., Hanamata S., Kubo T., Noguchi Y., Yagi C., Nagata N., Yamamoto T., Ohnishi T., Okazaki Y., Kitahata N., Ando D., Ishikawa M., Wada S., Miyao A., Hirochika H., Shimada H., Makino A., Saito K., Ishida H., Kinoshita T., Kurata N., Kuchitsu K.
Autophagy 2014  10(5)  878-88
OsATG7 is required for autophagy-dependent lipid metabolism in rice postmeiotic anther development.
Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011  18(5)  363-77
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
Chung T., Suttangkakul A., Richard D Vierstra
Plant Physiol. 2009  149(1)  220-34
The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availability.
TextPresso Search Search textpresso for ATG7 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology starch catabolic process( GO:0005983 )
endosperm development( GO:0009960 )
seed development( GO:0048316 )
anther development( GO:0048653 )
phosphatidylcholine metabolic process( GO:0046470 )
anther dehiscence( GO:0009901 )
pollen germination( GO:0009846 )
lipid metabolic process( GO:0006629 )
cytoplasm( GO:0005737 )
catalytic activity( GO:0003824 )
nucleotide binding( GO:0000166 )
autophagy( GO:0006914 )
leaf senescence( GO:0010150 )
pollen maturation( GO:0010152 )
regulation of starch biosynthetic process( GO:0010581 )
regulation of carbohydrate metabolic process( GO:0006109 )
seed maturation( GO:0010431 )
Trait Ontology male sterility type( TO:0000106 )
leaf senescence( TO:0000249 )
leaf size( TO:0002637 )
gibberellic acid content( TO:0002675 )
cytokinin content( TO:0002660 )
seed development trait( TO:0000653 )
grain size( TO:0000397 )
chalky endosperm( TO:0000266 )
starch content( TO:0000696 )
seed maturation( TO:0002661 )
starch grain size( TO:0002655 )
Plant Ontology anther development stage( PO:0001004 )
G anther dehiscence stage( PO:0001035 )
endosperm development stage( PO:0007633 )
seed development stage( PO:0001170 )
seed maturation stage( PO:0007632 )
4 leaf senescence stage( PO:0001054 )
pollen development stage( PO:0001007 )
Related Strains
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Phenotype images
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Last updated
Jul 1, 2020


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