Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ATG5
Gene Symbol Synonym OsATG5, Atg5
CGSNL Gene Name AUTOPHAGY ASSOCIATED GENE 5
Gene Name Synonym autophagy 5, AUTOPHAGY RELATED5
Protein Name
Allele
Chromosome No. 2
Explanation Q6ZGL4.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK063557
MSU ID LOC_Os02g02570.1
RAP ID Os02g0117800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang X., Yin Y., Su Y., Jia Z., Jiang L., Lu Y., Zheng H., Peng J., Rao S., Wu G., Chen J., Yan F.
PLoS Pathog. 2021  17(9)  e1009963
eIF4A, a target of siRNA derived from rice stripe virus, negatively regulates antiviral autophagy by interacting with ATG5 in Nicotiana benthamiana.
Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011  18(5)  363-77
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
Chung T., Suttangkakul A., Richard D Vierstra
Plant Physiol. 2009  149(1)  220-34
The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availability.
DB Reference
Gramene ID -
Ontologies
Gene Ontology defense response to virus( GO:0051607 )
response to virus( GO:0009615 )
cytoplasm( GO:0005737 )
autophagy( GO:0006914 )
protein transport( GO:0015031 )
Trait Ontology viral disease resistance( TO:0000148 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 18, 2022

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