Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol OSK4
Gene Symbol Synonym osk4, OsK4, OsATG1c, ATG1C, SnRK1B, snrk1b, SnRK1B/OSK24, OSK24, OsK24, OsSNRK1b, OsSnRK1.4, SnRK1.4, OsSnRK1alphaC, SnRK1alphaC
Gene Name Synonym protein kinase 4, autophagy 1c, AUTOPHAGY ASSOCIATED GENE 1C, SnRK1B protein kinase, sucrose non-fermenting-1 related protein kinase 1b
Allele snrk1alphac
Chromosome No. 8
Explanation D82035. BAA36299. AB101656. TO:0020101: starch mobilization. GO:2000280: regulation of root development.
Trait Class Biochemical character
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - Heading date
Seed - Morphological traits - Endosperm
cDNA Accession No. AK100591
MSU ID LOC_Os08g37800.1
RAP ID Os08g0484600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link to INSD Accession List
Link map Classical linkage map
Pathak B., Maurya C., Faria M.C., Alizada Z., Nandy S., Zhao S., Jamsheer K M., Srivastava V.
Plants (Basel) 2022  11(11) 
Targeting TOR and SnRK1 Genes in Rice with CRISPR/Cas9.
Chen Z., Zhou L., Jiang P., Lu R., Halford N.G., Liu C.
BMC Genomics 2021  22(1)  300
Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment.
Wierbowski S.D., Vo T.V., Falter-Braun P., Jobe T.O., Kruse L.H., Wei X., Liang J., Meyer M.J., Akturk N., Rivera-Erick CA., Cordero N.A., Paramo M.I., Shayhidin E.E., Bertolotti M., Tippens N.D., Akther K., Sharma R., Katayose Y., Salehi-Ashtiani K., Hao T., Ronald P.C., Ecker J.R., Schweitzer P.A., Kikuchi S., Mizuno H., Hill D.E., Vidal M., Moghe G.D., McCouch S.R., Yu H.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(21)  11836-11842
A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
Holappa L.D., Ronald P.C., Kramer E.M.
Front Plant Sci 2017  8  395
Evolutionary Analysis of Snf1-Related Protein Kinase2 (SnRK2) and Calcium Sensor (SCS) Gene Lineages, and Dimerization of Rice Homologs, Suggest Deep Biochemical Conservation across Angiosperms.
Liu X., Li X., Zhang C., Dai C., Zhou J., Ren C., Zhang J.
Physiol Plant 2016   
phosphoenolpyruvate carboxylase regulation in C4-PEPC-expressing transgenic rice during early responses to drought stress.
Sun X., Zhang Z., Wu J., Cui X., Feng D., Wang K., Xu M., Zhou L., Han X., Gu X., Lu T.
PLoS Genet. 2016  12(3)  e1005927
The Oryza sativa Regulator HDR1 Associates with the Kinase OsK4 to Control Photoperiodic Flowering.
Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011  18(5)  363-77
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
Lu CA,Lin CC,Lee KW,Chen JL,Huang LF,Ho SL,Liu HJ,Hsing YI,Yu SM
Plant Cell 2007  19  2484-99
The SnRK1A protein kinase plays a key role in sugar signaling during germination and seedling growth of rice.
Kanegae,H., Miyoshi,K., Hirose,T., Tsuchimoto,S., Mori,M., Nagato,Y. and Takano,M.
Plant Physiol. Biochem. 2005  43(7)  669-679
Expressions of rice sucrose non-fermenting-1 related protein kinase 1 genes are differently regulated during the caryopsis development.
Takano,M., Kajiya-Kanegae,H., Funatsuki,H. and Kikuchi,S.
Mol. Gen. Genet. 1998  260(4)  388-394
Rice has two distinct classes of protein kinase genes related to SNF1 of Saccharomyces cerevisiae, which are differently regulated in early seed development.
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DB Reference
Gramene ID -
Gene Ontology root development( GO:0048364 )
endosperm development( GO:0009960 )
signal transduction( GO:0007165 )
protein amino acid phosphorylation( GO:0006468 )
protein serine/threonine kinase activity( GO:0004674 )
ATP binding( GO:0005524 )
negative regulation of long-day photoperiodism, flowering( GO:0048579 )
Trait Ontology seed development trait( TO:0000653 )
days to heading( TO:0000137 )
plant height( TO:0000207 )
root length( TO:0000227 )
Plant Ontology plant callus( PO:0005052 )
seedling development stage( PO:0007131 )
Related Strains
Phenotype images
Last updated
Sep 29, 2022