|
Basic Information
|
|
CGSNL Gene Symbol
|
OSK3
|
|
Gene Symbol Synonym
|
osk3, OsATG1b, ATG1B, OSK5, osk5, OSK35, SnRK1b, OsK35, OsSnRK1.1, SnRK1.1, OsSnRK1alphaB, SnRK1alphaB
|
|
CGSNL Gene Name
|
PROTEIN KINASE 3
|
|
Gene Name Synonym
|
protein kinase 3, autophagy 1b, AUTOPHAGY ASSOCIATED GENE 1B, protein kinase 5, sucrose non-fermenting-1 related protein kinase 1b, SUCROSE NON-FERMENTING 1-RELATED PROTEIN KINASE 1.1
|
|
Protein Name
|
PROTEIN KINASE 3
|
|
Allele
|
snrk1alphab, ossnrk1.1-1, ossnrk1.1-2, ossnrk1.1-3
|
|
Chromosome No.
|
3
|
|
Explanation
|
D82038, D82036. AB101657. GO:2000280: regulation of root development.
|
|
Trait Class
|
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Vegetative organ - Root
Character as QTL - Germination
Biochemical character
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK069206
|
|
MSU ID
|
LOC_Os03g17980.1
LOC_Os03g17980.2
|
|
RAP ID
|
Os03g0289100
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
Link to INSD Accession List
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Zhang C., Wang H., Tian X., Lin X., Han Y., Han Z., Sha H., Liu J., Liu J., Zhang J., Bu Q., Fang J.
Nat Commun 2024 15(1) 2211
A transposon insertion in the promoter of OsUBC12 enhances cold tolerance during japonica rice germination.
|
|
Pathak B., Maurya C., Faria M.C., Alizada Z., Nandy S., Zhao S., Jamsheer K M., Srivastava V.
Plants (Basel) 2022 11(11)
Targeting TOR and SnRK1 Genes in Rice with CRISPR/Cas9.
|
|
Chen Z., Zhou L., Jiang P., Lu R., Halford N.G., Liu C.
BMC Genomics 2021 22(1) 300
Genome-wide identification of sucrose nonfermenting-1-related protein kinase (SnRK) genes in barley and RNA-seq analyses of their expression in response to abscisic acid treatment.
|
|
Liu X., Li X., Zhang C., Dai C., Zhou J., Ren C., Zhang J.
Physiol Plant 2016
phosphoenolpyruvate carboxylase regulation in C4-PEPC-expressing transgenic rice during early responses to drought stress.
|
|
Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011 18(5) 363-77
Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
|
|
Kanegae,H., Miyoshi,K., Hirose,T., Tsuchimoto,S., Mori,M., Nagato,Y. and Takano,M.
Plant Physiol. Biochem. 2005 43(7) 669-679
Expressions of rice sucrose non-fermenting-1 related protein kinase 1 genes are differently regulated during the caryopsis development.
|
|
Takano,M., Kajiya-Kanegae,H., Funatsuki,H. and Kikuchi,S.
Mol. Gen. Genet. 1998 260(4) 388-394
Rice has two distinct classes of protein kinase genes related to SNF1 of Saccharomyces cerevisiae, which are differently regulated in early seed development.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
abscisic acid mediated signaling( GO:0009738 )
response to abscisic acid stimulus( GO:0009737 )
response to cold( GO:0009409 )
regulation of seed germination( GO:0010029 )
root development( GO:0048364 )
endosperm development( GO:0009960 )
signal transduction( GO:0007165 )
protein amino acid phosphorylation( GO:0006468 )
protein serine/threonine kinase activity( GO:0004674 )
ATP binding( GO:0005524 )
protein amino acid autophosphorylation( GO:0046777 )
|
|
Trait Ontology
|
plant height( TO:0000207 )
root length( TO:0000227 )
germinability at low temperature( TO:0000483 )
abscisic acid sensitivity( TO:0000615 )
germination rate( TO:0000430 )
cold tolerance( TO:0000303 )
|
|
Plant Ontology
|
plant callus( PO:0005052 )
seedling development stage( PO:0007131 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Aug 29, 2024
|
Update info.