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Basic Information
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CGSNL Gene Symbol
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RFT1
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Gene Symbol Synonym
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FT-L 3, OsFTL3, FTL3, FT-L3, RFT, OsRFT1
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CGSNL Gene Name
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RICE FLOWERING-LOCUS T 1
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Gene Name Synonym
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Rice Flowering-locus T 1, RICE FLOWERING LOCUS T 1, FT-like gene 3, RFT
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Protein Name
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Allele
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rft1-1, rft1-2, rft1
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Chromosome No.
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6
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Explanation
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RFT1 encodes a major LD florigen. Q8VWH2. AB062675, AB062676. AB426870-AB426878 (O. sativa and other wild rice species).
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Trait Class
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Reproductive organ - Heading date
Character as QTL - Yield and productivity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AB062676
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MSU ID
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LOC_Os06g06300.1
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RAP ID
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Os06g0157500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Kim E.G., Jang Y.H., Park J.R., Wang X.H., Jan R., Farooq M., Asaf S., Asif S., Kim K.M.
Rice (N Y) 2024 17(1) 48
OsCKq1 Regulates heading date and grain weight in Rice in Response to Day Length.
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Lei Y., Ma Q., Zhang Y., Li J., Ning X., Wang Y., Ge X., Zhao H., Lin H.
Front Plant Sci 2024 15 1340260
Functional dissection of Phytochrome A in plants.
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Kim Y.K.
Biosci. Biotechnol. Biochem. 2024 88(11) 1307-1315
Knockout of OsWOX13 moderately delays flowering in rice under natural long-day conditions.
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Lee S.J., Kim Y., Kang K., Yoon H., Kang J., Cho S.H., Paek N.C.
Plant Cell Environ. 2024 47(12) 4498-4515
rice CRYPTOCHROME-INTERACTING BASIC HELIX-LOOP-HELIX 1-LIKE interacts with OsCRY2 and promotes flowering by upregulating Early heading date 1.
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Colleoni P.E., van Es SW., Winkelmolen T., Immink R.G.H., van Esse GW.
J. Exp. Bot. 2024 75(14) 4195-4209
flowering time genes branching out.
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Zhang X., Feng Q., Miao J., Zhu J., Zhou C., Fan D., Lu Y., Tian Q., Wang Y., Zhan Q., Wang Z.Q., Wang A., Zhang L., Shangguan Y., Li W., Chen J., Weng Q., Huang T., Tang S., Si L., Huang X., Wang Z.X., Han B.
Plant Cell 2023
The WD40 domain-containing protein Ehd5 positively regulates flowering in rice (Oryza sativa).
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Mineri L., Cerise M., Giaume F., Vicentini G., Martignago D., Chiara M., Galbiati F., Spada A., Horner D., Fornara F., Brambilla V.
Plant J. 2023
Rice florigens control a common set of genes at the shoot apical meristem including the F-BOX BROADER tiller angle 1 that regulates tiller angle and spikelet development.
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Tang H., Fan J., Wang R., Zhu J., Xiang X., Dong J., Zhou L., Wang L.
G3 (Bethesda) 2023 13(7)
Changes in the expression pattern of OsWUS negatively regulate plant stature and panicle development in rice.
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Fan X., Wang P., Qi F., Hu Y., Li S., Zhang J., Liang L., Zhang Z., Liu J., Xiong L., Xing Y.
J Genet Genomics 2023
The CCT transcriptional activator Ghd2 constantly delays the heading date by upregulating CO3 in rice.
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Gong F., Zhang K., Wen J., Yu S., Li W., Du G., Wu C., Zhu K., Xu Y.
Int J Mol Sci 2023 24(11)
Rice OsMRG702 and Its Partner OsMRGBP Control flowering time through H4 Acetylation.
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Yin Y., Yan Z., Guan J., Huo Y., Wang T., Li T., Cui Z., Ma W., Wang X., Chen W.
Plant Physiol. 2023 192(1) 205-221
Two interacting basic helix-loop-helix transcription factors control flowering time in rice.
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Gu Z., Gong J., Zhu Z., Li Z., Feng Q., Wang C., Zhao Y., Zhan Q., Zhou C., Wang A., Huang T., Zhang L., Tian Q., Fan D., Lu Y., Zhao Q., Huang X., Yang S., Han B.
Nat. Genet. 2023 55(10) 1745-1756
Structure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis.
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Shin W.J., Nam A.H., Kim J.Y., Kwak J.S., Song J.T., Seo H.S.
Plant Sci. 2022 320 111278
Intronic long noncoding RNA, RICE FLOWERING ASSOCIATED (RIFLA), regulates OsMADS56-mediated flowering in rice.
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Lin X., Huang Y., Rao Y., Ouyang L., Zhou D., Zhu C., Fu J., Chen C., Yin J., Bian J., He H., Zou G., Xu J.
BMC Plant Biol. 2022 22(1) 612
A base substitution in OsphyC disturbs its Interaction with OsphyB and affects flowering time and chlorophyll synthesis in rice.
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Cai Z., Zhang Y., Tang W., Chen X., Lin C., Liu Y., Ye Y., Wu W., Duan Y.
Front Plant Sci 2022 13 853042
LUX ARRHYTHMO Interacts With ELF3a and ELF4a to Coordinate Vegetative Growth and Photoperiodic Flowering in Rice.
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Lu S., Zhang N., Xu Y., Chen H., Huang J., Zou B.
Int J Mol Sci 2022 23(21)
Functional Conservation and Divergence of <i>mos1</i> That Controls Flowering Time and seed size in Rice and <i>Arabidopsis</i>.
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Molla K.A.
Plant Cell 2022 34(10) 3489-3490
Flowering time and photoperiod sensitivity in rice: Key players and their interactions identified.
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Shim Y., Lim C., Seong G., Choi Y., Kang K., Paek N.C.
Plant Cell Environ. 2022 45(8) 2446-2459
The AP2/ERF transcription factor LATE FLOWERING SEMI-DWARF suppresses long-day-dependent repression of flowering.
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Zhao C., Zhu M., Guo Y., Sun J., Ma W., Wang X.
Plants (Basel) 2022 11(12)
Genomic Survey of <i>PEBP</i> Gene Family in Rice: Identification, Phylogenetic Analysis, and Expression Profiles in Organs and under Abiotic Stresses.
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Yoon H., Shim Y., Yoo S.C., Kang K., Paek N.C.
Int J Mol Sci 2021 22(3)
The Rice CHD3/Mi-2 Chromatin Remodeling Factor Rolled Fine Striped Promotes Flowering Independent of Photoperiod.
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Cerise M., Giaume F., Galli M., Khahani B., Lucas J., Podico F., Tavakol E., Parcy F., Gallavotti A., Brambilla V., Fornara F.
New Phytol. 2021 229(1) 429-443
OsFD4 promotes the rice floral transition via florigen activation complex formation in the shoot apical meristem.
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Sun C., Zhang K., Zhou Y., Xiang L., He C., Zhong C., Li K., Wang Q., Yang C., Wang Q., Chen C., Chen D., Wang Y., Liu C., Yang B., Wu H., Chen X., Li W., Wang J., Xu P., Wang P., Fang J., Chu C., Deng X.
Plant Biotechnol. J. 2021 19(8) 1644-1657
Dual function of clock component OsLHY sets critical day length for photoperiodic flowering in rice.
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Liang L., Zhang Z., Cheng N., Liu H., Song S., Hu Y., Zhou X., Zhang J., Xing Y.
Plant Cell Environ. 2021 44(3) 842-855
The transcriptional repressor OsPRR73 links circadian clock and photoperiod pathway to control heading date in rice.
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Du K., Luo Q., Yin L., Wu J., Liu Y., Gan J., Dong A., Shen W.H.
Nat Commun 2020 11(1) 5717
OsChz1 acts as a histone chaperone in modulating chromatin organization and genome function in rice.
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Xu Z., Chen Z., Wang R., Miao Y., Gao H., Tang S., Zhang H., Liu Q.
Molecular Breeding 2020 40(27)
Characterization and fine-mapping of qHd2-1, a minor quantitative locus that affects heading date under long-day conditions in rice (Oryza sativa L.)
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Fang M., Zhou Z., Zhou X., Yang H., Li M., Li H.
PeerJ 2019 7 e6422
Overexpression of <i>OsFTL10</i> induces early flowering and improves drought tolerance in <i>Oryza sativa</i> L.
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Cui Y., Zhu M., Xu Z., Xu Q.
Theor. Appl. Genet. 2019 132(6) 1887-1896
Assessment of the effect of ten heading time genes on reproductive transition and yield components in rice using a CRISPR/Cas9 system.
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Liu B., Liu Y., Wang B., Luo Q., Shi J., Gan J., Wen-Hui Shen, Yu Y., Dong A.
Nat Commun 2019 10(1) 2999
The transcription factor OsSUF4 interacts with SDG725 in promoting H3K36me3 establishment.
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Cai M., Chen S., Wu M., Zheng T., Zhou L., Li C., Zhang H., Wang J., Xu X., Chai J., Ren Y., Guo X., Zhang X., Lei C., Cheng Z., Wang J., Jiang L., Zhai H., Wang H., Zhu S., Wan J.
Plant Cell Rep. 2019 38(5) 521-532
Early heading 7 interacts with DTH8, and regulates flowering time in rice.
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Fang J., Zhang F., Wang H., Wang W., Zhao F., Li Z., Sun C., Chen F., Xu F., Chang S., Wu L., Bu Q., Wang P., Xie J., Chen F., Huang X., Zhang Y., Zhu X., Han B., Deng X., Chu C.
Proc. Natl. Acad. Sci. U.S.A. 2019 116(37) 18717-18722
<i>Ef-cd</i> locus shortens rice maturity duration without yield penalty.
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He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018 8(1) 14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
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Kim S.R., Torollo G., Yoon M.R., Kwak J., Lee C.K., Prahalada G.D., Choi I.R., Yeo U.S., Jeong O.Y., Jena K.K., Lee J.S.
Front Plant Sci 2018 9 1827
Loss-of-Function Alleles of <i>Heading date 1</i> (<i>Hd1</i>) Are Associated With Adaptation of Temperate <i>Japonica</i> Rice Plants to the Tropical Region.
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Zeng L., Liu X., Zhou Z., Li D., Zhao X., Zhu L., Luo Y., Hu S.
BMC Plant Biol. 2018 18(1) 157
Identification of a G2-like transcription factor, OsPHL3, functions as a negative regulator of flowering in rice by co-expression and reverse genetic analysis.
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Gong R., Cao H., Zhang J., Xie K., Wang D., Yu S.
Plant J. 2018 94(1) 32-47
Divergent functions of the GAGA-binding transcription factor family in rice.
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Cho L.H., Yoon J., Wai A.H., An G.
Mol. Cells 2018 41(7) 665-675
<i>Histone Deacetylase 701 (HDT701)</i> Induces Flowering in Rice by Modulating Expression of <i>OsIDS1</i>.
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Guo S., Dai S., Singh P.K., Wang H., Wang Y., Tan J.L.H., Wee W., Ito T.
Front Plant Sci 2018 9 555
A Membrane-Bound NAC-Like Transcription Factor OsNTL5 Represses the Flowering in <i>Oryza sativa</i>.
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Jiang P., Wang S., Jiang H., Cheng B., Wu K., Ding Y.
Plant Physiol. 2018 176(4) 2761-2771
The COMPASS-Like Complex Promotes Flowering and Panicle Branching in Rice.
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Jiang P., Wang S., Zheng H., Li H., Zhang F., Su Y., Xu Z., Lin H., Qian Q., Ding Y.
New Phytol. 2018 219(1) 422-435
SIP1 participates in regulation of flowering time in rice by recruiting OsTrx1 to Ehd1.
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Wang W., Hu B., Yuan D., Liu Y., Che R., Hu Y., Ou S., Liu Y., Zhang Z., Wang H., Li H., Jiang Z., Zhang Z., Gao X., Qiu Y., Meng X., Liu Y., Bai Y., Liang Y., Wang Y., Zhang L., Li L., Sodmergen, Jing H., Li J., Chu C.
Plant Cell 2018 30(3) 638-651
Expression of the Nitrate Transporter Gene <i>OsNRT1.1A/OsNPF6.3</i> Confers High Yield and Early Maturation in Rice.
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Wu W., Zhang Y., Zhang M., Zhan X., Shen X., Yu P., Chen D., Liu Q., Sinumporn S., Hussain K., Cheng S., Cao L.
Biochem. Biophys. Res. Commun. 2018 495(1) 1349-1355
The RICE CONSTANS-like protein OsCOL15 suppresses flowering by promoting Ghd7 and repressing RID1.
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Song S., Wang G., Hu Y., Liu H., Bai X., Qin R., Xing Y.
J. Exp. Bot. 2018 69(18) 4283-4293
OsMFT1 increases spikelets per panicle and delays heading date in rice by suppressing Ehd1, FZP and SEPALLATA-like genes.
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Zhu C., Peng Q., Fu D., Zhuang D., Yu Y., Duan M., Xie W., Cai Y., Ouyang Y., Lian X., Wu C.
Plant Cell 2018 30(10) 2352-2367
The E3 Ubiquitin Ligase HAF1 Modulates Circadian Accumulation of EARLY FLOWERING3 to Control heading date in Rice under Long-Day Conditions.
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Chen J.Y., Zhang H.W., Zhang H.L., Ying J.Z., Ma L.Y., Zhuang J.Y.
BMC Plant Biol. 2018 18(1) 112
Natural variation at qHd1 affects heading date acceleration at high temperatures with pleiotropism for yield traits in rice.
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Song S., Chen Y., Liu L., Wang Y., Bao S., Zhou X., Teo Z.W., Mao C., Gan Y., Yu H.
Plant Cell 2017 29(3) 491-507
OsFTIP1-Mediated Regulation of Florigen Transport in Rice Is Negatively Regulated by the Ubiquitin-Like Domain Kinase OsUbDKgamma4.
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Wu W., Zheng X.M., Chen D., Zhang Y., Ma W., Zhang H., Sun L., Yang Z., Zhao C., Zhan X., Shen X., Yu P., Fu Y., Zhu S., Cao L., Cheng S.
Plant Sci. 2017 260 60-69
OsCOL16, encoding a CONSTANS-like protein, represses flowering by up-regulating Ghd7 expression in rice.
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Liu K., Yu Y., Dong A., Shen W.H.
New Phytol. 2017 215(2) 609-623
SET DOMAIN GROUP701 encodes a H3K4-methytransferase and regulates multiple key processes of rice plant development.
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Li C., Zhu S., Zhang H., Chen L., Cai M., Wang J., Chai J., Wu F., Cheng Z., Guo X., Zhang X., Wan J.
Biochem. Biophys. Res. Commun. 2017 486(3) 720-725
OsLBD37 and OsLBD38, two class II type LBD proteins, are involved in the regulation of heading date by controlling the expression of Ehd1 in rice.
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Zhu S., Wang J., Cai M., Zhang H., Wu F., Xu Y., Li C., Cheng Z., Zhang X., Guo X., Sheng P., Wu M., Wang J., Lei C., Wang J., Zhao Z., Wu C., Wang H., Wan J.
J. Exp. Bot. 2017 68(3) 553-568
The OsHAPL1-DTH8-Hd1 complex functions as the transcription regulator to repress heading date in rice.
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Deng L., Li L., Zhang S., Shen J., Li S., Hu S., Peng Q., Xiao J., Wu C.
PLoS Genet. 2017 13(2) e1006642
Suppressor of RID1 (SID1) shares common targets with RID1 on florigen genes to initiate floral transition in rice.
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Tan J., Wu F., Wan J.
Plant Signal Behav 2017 12(1) e1267893
Flowering time regulation by the CONSTANS-like gene OsCOL10.
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Wu Q., Liu X., Yin D., Yuan H., Xie Q., Zhao X., Li X., Zhu L., Li S., Li D.
BMC Plant Biol. 2017 17(1) 166
Constitutive expression of OsDof4, encoding a C2-C2 zinc finger transcription factor, confesses its distinct flowering effects under long- and short-day photoperiods in rice (Oryza sativa L.).
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Brambilla V., Martignago D., Goretti D., Cerise M., Somssich M., de Rosa M., Galbiati F., Shrestha R., Lazzaro F., Simon R., Fornara F.
Plant Cell 2017 29(11) 2801-2816
Antagonistic Transcription Factor Complexes Modulate the Floral Transition in Rice.
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Du A., Tian W., Wei M., Yan W., He H., Zhou D., Huang X., Li S., Ouyang X.
Mol Plant 2017 10(7) 948-961
The DTH8-Hd1 module Mediates Day-Length-Dependent Regulation of Rice Flowering.
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Tan J., Jin M., Wang J., Wu F., Sheng P., Cheng Z., Wang J., Zheng X., Chen L., Wang M., Zhu S., Guo X., Zhang X., Liu X., Wang C., Wang H., Wu C., Wan J.
Plant Cell Physiol. 2016 57(4) 798-812
OsCOL10, a CONSTANS-like Gene, Functions as a flowering time Repressor Downstream of Ghd7 in Rice.
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Du Y., He W., Deng C., Chen X., Gou L., Zhu F., Guo W., Zhang J., Wang T.
PLoS ONE 2016 11(3) e0150458
Flowering-Related RING Protein 1 (FRRP1) Regulates flowering time and Yield Potential by Affecting histone H2B Monoubiquitination in Rice (Oryza Sativa).
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Sun X., Zhang Z., Wu J., Cui X., Feng D., Wang K., Xu M., Zhou L., Han X., Gu X., Lu T.
PLoS Genet. 2016 12(3) e1005927
The Oryza sativa Regulator HDR1 Associates with the Kinase OsK4 to Control Photoperiodic Flowering.
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Liu H., Gu F., Dong S., Liu W., Wang H., Chen Z., Wang J.
Biochem. Biophys. Res. Commun. 2016 479(2) 173-178
CONSTANS-like 9 (COL9) delays the flowering time in Oryza sativa by repressing the Ehd1 pathway.
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Wang J., Wu F., Zhu S., Xu Y., Cheng Z., Wang J., Li C., Sheng P., Zhang H., Cai M., Guo X., Zhang X., Wang C., Wan J.
FEBS Lett. 2016
Overexpression of OsMYB1R1-VP64 fusion protein increases grain yield in rice by delaying flowering time.
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Cho L.H., Yoon J., Pasriga R., An G.
Plant Physiol. 2016 170(4) 2159-71
Homodimerization of Ehd1 Is Required to Induce Flowering in Rice.
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Sheng P., Wu F., Tan J., Zhang H., Ma W., Chen L., Wang J., Wang J., Zhu S., Guo X., Wang J., Zhang X., Cheng Z., Bao Y., Wu C., Liu X., Wan J.
Plant Mol. Biol. 2016 92(1-2) 209-22
A CONSTANS-like transcriptional activator, OsCOL13, functions as a negative regulator of flowering downstream of OsphyB and upstream of Ehd1 in rice.
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Bai B., Zhao J., Li Y., Zhang F., Zhou J., Chen F., Xie X.
Plant Sci. 2016 247 25-34
OsBBX14 delays heading date by repressing florigen gene expression under long and short-day conditions in rice.
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Li S., Yue W., Wang M., Qiu W., Zhou L., Shou H.
Front Plant Sci 2016 7 465
Mutation of OsGIGANTEA Leads to Enhanced Tolerance to Polyethylene Glycol-Generated Osmotic Stress in Rice.
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Jeong H.J., Yang J., Cho L.H., An G.
Plant Cell Rep. 2016 35(4) 905-20
OsVIL1 controls flowering time in rice by suppressing OsLF under short days and by inducing Ghd7 under long days.
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Fan T., Li X., Yang W., Xia K., Ouyang J., Zhang M.
PLoS ONE 2015 10(5) e0125833
Rice osa-miR171c Mediates Phase Change from Vegetative to Reproductive Development and shoot apical meristem Maintenance by Repressing Four OsHAM Transcription Factors.
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Jin J., Shi J., Liu B., Liu Y., Huang Y., Yu Y., Dong A.
Plant Physiol. 2015
MRG702, a reader protein of H3K4me3 and H3K36me3, is involved in brassinosteroid-regulated growth and flowering time control in rice.
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Yang Y., Fu D., Zhu C., He Y., Zhang H., Liu T., Li X., Wu C.
Plant Cell 2015
The RING-Finger Ubiquitin Ligase HAF1 Mediates heading date 1 Degradation during Photoperiodic Flowering in Rice.
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Tamaki S., Tsuji H., Matsumoto A., Fujita A., Shimatani Z., Terada R., Sakamoto T., Kurata T., Shimamoto K.
Proc. Natl. Acad. Sci. U.S.A. 2015 112(8) E901-10
FT-like proteins induce transposon silencing in the shoot apex during floral induction in rice.
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Zhang L., Li Q., Dong H., He Q., Liang L., Tan C., Han Z., Yao W., Li G., Zhao H., Xie W., Xing Y.
Sci Rep 2015 5 7663
Three CCT domain-containing genes were identified to regulate heading date by candidate gene-based association mapping and transformation in rice.
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Kim S.K., Park H.Y., Jang Y.H., Lee K.C., Chung Y.S., Lee J.H., Kim J.K.
Planta 2015
OsNF-YC2 and OsNF-YC4 proteins inhibit flowering under long-day conditions in rice.
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Yokoo T., Saito H., Yoshitake Y., Xu Q., Asami T., Tsukiyama T., Teraishi M., Okumoto Y., Tanisaka T.
PLoS ONE 2014 9(4) e96064
Se14, encoding a JmjC domain-containing protein, plays key roles in long-day suppression of rice flowering through the demethylation of H3K4me3 of RFT1.
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Gao H., Jin M., Zheng X.M., Chen J., Yuan D., Xin Y., Wang M., Huang D., Zhang Z., Zhou K., Sheng P., Ma J., Ma W., Deng H., Jiang L., Liu S., Wang H., Wu C., Yuan L., Wan J.
Proc. Natl. Acad. Sci. U.S.A. 2014
Days to heading 7, a major quantitative locus determining photoperiod sensitivity and regional adaptation in rice.
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Wu W., Zheng X.M., Lu G., Zhong Z., Gao H., Chen L., Wu C., Wang H.J., Wang Q., Zhou K., Wang J.L., Wu F., Zhang X., Guo X., Cheng Z., Lei C., Lin Q., Jiang L., Wang H., Ge S., Wan J.
Proc. Natl. Acad. Sci. U.S.A. 2013 110(8) 2775-80
Association of functional nucleotide polymorphisms at DTH2 with the northward expansion of rice cultivation in Asia.
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Gao H., Zheng X.M., Fei G., Chen J., Jin M., Ren Y., Wu W., Zhou K., Sheng P., Zhou F., Jiang L., Wang J., Zhang X., Guo X., Wang J.L., Cheng Z., Wu C., Wang H., Wan J.M.
PLoS Genet. 2013 9(2) e1003281
Ehd4 encodes a novel and Oryza-genus-specific regulator of photoperiodic flowering in rice.
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Liu D., Cai X.
J Integr Plant Biol 2013 55(9) 876-87
OsRRMh, a Spen-like Gene, Plays an Important Role during the Vegetative to Reproductive Transition in Rice.
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Yang Y., Peng Q., Chen G.X., Li X.H., Wu C.Y.
Mol Plant 2013 6(1) 202-15
OsELF3 is Involved in Circadian Clock Regulation for Promoting Flowering under Long-Day Conditions in Rice.
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Ogiso-Tanaka E., Matsubara K., Yamamoto S., Nonoue Y., Wu J., Fujisawa H., Ishikubo H., Tanaka T., Ando T., Matsumoto T., Yano M.
PLoS ONE 2013 8(10) e75959
Natural Variation of the RICE FLOWERING LOCUS T 1 Contributes to flowering time Divergence in Rice.
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Naeem M.a c, Freed S.b, Quan Z.G.a
Int J Agric Biol 2013 15 631-639
Molecular genetic studies of heading date gene OsMADS50 by using single segment substitution lines in Oryza sativa
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Sun C., Fang J., Zhao T., Xu B., Zhang F., Liu L., Tang J., Zhang G., Deng X., Chen F., Qian Q., Cao X., Chu C.
Plant Cell 2012 24(8) 3235-47
The histone methyltransferase SDG724 Mediates H3K36me2/3 Deposition at MADS50 and RFT1 and Promotes Flowering in Rice.
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Li C., Huang L., Xu C., Zhao Y., Zhou D.X.
PLoS ONE 2011 6(7) e21789
Altered levels of histone deacetylase OsHDT1 affect differential gene expression patterns in hybrid rice.
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Endo-Higashi N. , Izawa T.
Plant Cell Physiol. 2011 52(6) 1083-94
Flowering Time Genes Heading date 1 and Early heading date 1 Together Control Panicle Development in Rice.
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Ebana K,Shibaya T,Wu J,Matsubara K,Kanamori H,Yamane H,Yamanouchi U,Mizubayashi T,Kono I,Shomura A,Ito S,Ando T,Hori K,Matsumoto T,Yano M
Theor. Appl. Genet. 2011 122(6) 1199-210
Uncovering of major genetic factors generating naturally occurring variation in heading date among Asian rice cultivars.
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Osugi A., Itoh H., Ikeda-Kawakatsu K., Takano M., Izawa T.
Plant Physiol. 2011 157(3) 1128-37
Molecular dissection of the roles of phytochrome in photoperiodic flowering in rice.
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Li W., Han Y., Tao F., Chong K.
J. Plant Physiol. 2011 168(15) 1837-43
Knockdown of SAMS genes encoding S-adenosyl-l-methionine synthetases causes methylation alterations of DNAs and histones and leads to late flowering in rice.
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Komiya R., Yokoi S., Shimamoto K.
Development 2009 136(20) 3443-50
A gene network for long-day flowering activates RFT1 encoding a mobile flowering signal in rice.
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Hagiwara,W.E., Uwatoko,N., Sasaki,A., Matsubara,K., Nagano,H., Onishi,K. and Sano,Y.
Mol. Ecol. 2009 18(7) 1537-49
Diversification in flowering time due to tandem FT-like gene duplication, generating novel Mendelian factors in wild and cultivated rice
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Komiya R,Ikegami A,Tamaki S,Yokoi S,Shimamoto K
Development 2008 135 767-74
Hd3a and RFT1 are essential for flowering in rice.
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Park SJ,Kim SL,Lee S,Je BI,Piao HL,Park SH,Kim CM,Ryu CH,Park SH,Xuan YH,Colasanti J,An G,Han CD
Plant J. 2008 56 1018-29
Rice Indeterminate 1 (OsId1) is necessary for the expression of Ehd1 (Early heading date 1) regardless of photoperiod.
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Faure S, Higgins J, Turner A, Laurie DA.
Genetics 2007 176(1) 599-609
The FLOWERING LOCUS T-like gene family in barley (Hordeum vulgare).
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Ishikawa R., Tamaki S., Yokoi S., Inagaki N., Shinomura T., Takano M., Shimamoto K.
Plant Cell 2005 17(12) 3326-36
Suppression of the floral activator Hd3a is the principal cause of the night break effect in rice.
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Chardon F., Damerval C.
J. Mol. Evol. 2005 61(5) 579-90
Phylogenomic analysis of the PEBP gene family in cereals.
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Kojima, S., Takahashi, Y., Kobayashi, Y., Monna, L., Sasaki, T., Araki, T. and Yano, M.
Plant Cell Physiol. 2002 43 1096-1105
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Izawa, T., T. Oikawa, N. Sugiyama, T. Tanisaka, M. Yano and K. Shimamoto
Genes Dev. 2002 16 2006-2020
Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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nucleus( GO:0005634 )
flower development( GO:0009908 )
regulation of timing of transition from vegetative to reproductive phase( GO:0048510 )
photoperiodism, flowering( GO:0048573 )
response to light stimulus( GO:0009416 )
cytoplasm( GO:0005737 )
phospholipid binding( GO:0005543 )
phosphatidylcholine binding( GO:0031210 )
phosphatidylethanolamine binding( GO:0008429 )
response to abscisic acid stimulus( GO:0009737 )
response to jasmonic acid stimulus( GO:0009753 )
cell differentiation( GO:0030154 )
inflorescence development( GO:0010229 )
regulation of flower development( GO:0009909 )
regulation of long-day photoperiodism, flowering( GO:0048586 )
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Trait Ontology
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days to heading( TO:0000137 )
filled grain number( TO:0000447 )
yield trait( TO:0000371 )
abscisic acid sensitivity( TO:0000615 )
jasmonic acid sensitivity( TO:0000172 )
light sensitivity( TO:0000075 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Jan 17, 2025
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Update info.
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