Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol LHCA2
Gene Symbol Synonym lhcA, Lhca2, OsLhca2
CGSNL Gene Name LIGHT-HARVESTING CHLOROPHYLL A/B-BINDING PROTEIN A2
Gene Name Synonym PSI type II chlorophyll a/b-binding protein, light-harvesting complex I chlorophyll a/b binding protein 2
Protein Name LIGHT-HARVESTING CHLOROPHYLL A/B-BINDING PROTEIN A2
Allele
Chromosome No. 7
Explanation Lhca2 in Lian et al. 2021.
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK119176
MSU ID LOC_Os07g38960.1
LOC_Os07g38960.2
RAP ID Os07g0577600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Cheng F., Qi Y., Lei K., Yang H., Lei Y., Ahmed T., Qi X., Li Z.
Front Plant Sci 2025  16  1653494
Laser diode irradiation mitigates salt stress in rice through coordinated physiological and molecular responses.
Cui Y., Song J., Tang L., Wang J.
Genes (Basel) 2024  15(10) 
<i>YELLOW LEAF AND DWARF 7,</i> Encoding a Novel ankyrin domain-containing protein, Affects Chloroplast Development in Rice.
Zang Y., Yao Y., Xu Z., Wang B., Mao Y., Wang W., Zhang W., Zhang H., Liu L., Wang Z., Liang G., Yang J., Zhou Y., Gu J.
Int J Mol Sci 2022  23(22) 
The Relationships among "STAY-GREEN" Trait, Post-Anthesis Assimilate Remobilization, and Grain Yield in Rice (<i>Oryza sativa</i> L.).
Zeng F., Zhu L., Wang G., Liang Y., Ma D., Wang J.
Front Plant Sci 2022  13  915050
Higher CO2 Assimilation in Selected Rice Recombinant Inbred Lines Is Driven by Higher CO2 Diffusion and Light Use Efficiency Related to Leaf Anatomy and mesophyll cell Density.
Wang B., Wang Y., Yu W., Wang L., Lan Q., Wang Y., Chen C., Zhang Y.
Biology (Basel) 2022  11(12) 
Knocking Out the Transcription Factor OsNAC092 Promoted Rice drought tolerance.
Lian L., Lin Y., Wei Y., He W., Cai Q., Huang W., Zheng Y., Xu H., Wang F., Zhu Y., Luo X., Xie H., Zhang J.
BMC Plant Biol. 2021  21(1)  287
PEPC of sugarcane regulated glutathione S-transferase and altered carbon-nitrogen metabolism under different N source concentrations in Oryza sativa.
Xu X., Chen Z., Shi Y.F., Wang H.M., He Y., Shi L., Chen T., Wu J.L., Zhang X.B.
BMC Plant Biol. 2018  18(1)  264
Functional inactivation of OsGCNT induces enhanced disease resistance to Xanthomonas oryzae pv. oryzae in rice.
Higuchi-Takeuchi M., Ichikawa T., Kondou Y., Matsui K., Hasegawa Y., Kawashima M., Sonoike K., Mori M., Hirochika H., Matsui M.
Plant Physiol. 2011  157(1)  96-108
Functional analysis of two isoforms of leaf-type Ferredoxin-NADP(+)-oxidoreductase in rice using the heterologous expression system of Arabidopsis.
DB Reference
Gramene ID -
Ontologies
Gene Ontology chloroplast thylakoid membrane( GO:0009535 )
photosystem I( GO:0009522 )
photosystem II( GO:0009523 )
response to light stimulus( GO:0009416 )
photosynthesis, light harvesting in photosystem I( GO:0009768 )
chlorophyll binding( GO:0016168 )
photosynthesis, light harvesting( GO:0009765 )
Trait Ontology light sensitivity( TO:0000075 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jan 19, 2026

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