Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol TIFY9
Gene Symbol Synonym OsJAZ11, OsJAZ5, OsTIFY9, JAZ11, JAZ5, JAZ11/TIFY9
Gene Name Synonym Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 11.
Chromosome No. 4
Explanation Q7XV97. OsJAZ5 in Ye et al. (2009), Kashihara et al. 2019, Li et al. 2021, Gao et al. 2022, Sun et al. 2022, Mehra et al. 2022, Wang et al. 2021, Ma et al. 2023, Zhang et al. 2023, Wang et al. 2023. OsJAZ11 in Seo et al. (2011) and in Lee et al. (2013). AK240828 in Yamada et al. (2012). GO:2000022: regulation of jasmonic acid mediated signaling pathway.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - Heading date
Reproductive organ - panicle
Seed - Morphological traits
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
cDNA Accession No. AK107750
MSU ID LOC_Os04g32480.1
RAP ID Os04g0395800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Wang F., Song W., Huang C., Wei Z., Li Y., Chen J., Zhang H., Sun Z.
Viruses 2023  15(4) 
A Rice Receptor-like Protein Negatively Regulates Rice Resistance to Southern Rice Black-Streaked Dwarf Virus Infection.
Zhang H., Wang F., Song W., Yang Z., Li L., Ma Q., Tan X., Wei Z., Li Y., Li J., Yan F., Chen J., Sun Z.
Nat Commun 2023  14(1)  3011
Different viral effectors suppress hormone-mediated antiviral immunity of rice coordinated by OsNPR1.
Ma Q., Wang F., Song W., Huang C., Xie K., Wei Z., Li Y., Chen J., Zhang H., Sun Z.
Front Microbiol 2023  14  1131212
Transcriptome analysis of auxin transcription factor OsARF17-mediated rice stripe mosaic virus response in rice.
Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022  23(2) 
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
Mehra P., Pandey B.K., Verma L., Prusty A., Singh A.P., Sharma S., Malik N., Bennett M.J., Parida S.K., Giri J., Tyagi A.K.
Plant Direct 2022  6(5)  e401
<i>OsJAZ11</i> regulates spikelet and seed development in rice.
Sun B., Shang L., Li Y., Zhang Q., Chu Z., He S., Yang W., Ding X.
Int J Mol Sci 2022  23(9) 
Ectopic Expression of OsJAZs Alters Plant Defense and Development.
Wang L., Cao S., Wang P., Lu K., Song Q., Zhao F.J., Chen Z.J.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(13) 
DNA hypomethylation in tetraploid rice potentiates stress-responsive gene expression for salt tolerance.
Li L., Zhang H., Chen C., Huang H., Tan X., Wei Z., Li J., Yan F., Zhang C., Chen J., Sun Z.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(11) 
A class of independently evolved transcriptional repressors in plant RNA viruses facilitates viral infection and vector feeding.
Kong Y., Wang G., Chen X., Li L., Zhang X., Chen S., He Y., Hong G.
Plant Cell Environ. 2021   
OsPHR2 modulates phosphate starvation-induced OsMYC2 signalling and resistance to Xanthomonas oryzae pv. oryzae.
Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019  232  180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
Hakata M., Muramatsu M., Nakamura H., Hara N., Kishimoto M., Iida-Okada K., Kajikawa M., Imai-Toki N., Toki S., Nagamura Y., Yamakawa H., Ichikawa H.
Biosci. Biotechnol. Biochem. 2017  81(5)  906-913
Overexpression of TIFY genes promotes plant growth in rice through jasmonate signaling.
Tamiru M., Takagi H., Abe A., Yokota T., Kanzaki H., Okamoto H., Saitoh H., Takahashi H., Fujisaki K., Oikawa K., Uemura A., Natsume S., Jikumaru Y., Matsuura H., Umemura K., Terry M.J., Terauchi R.
New Phytol. 2016  210(4)  1282-1297
A chloroplast-localized protein LESION AND LAMINA BENDING affects defence and growth responses in rice.
Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013  8(1)  e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012  53(12)  2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011  65(6)  907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009  71(3)  291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
TextPresso Search Search textpresso for TIFY9 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology response to starvation( GO:0042594 )
cellular response to phosphate starvation( GO:0016036 )
response to salt stress( GO:0009651 )
photoperiodism, flowering( GO:0048573 )
defense response to virus( GO:0051607 )
jasmonic acid mediated signaling pathway( GO:0009867 )
response to jasmonic acid stimulus( GO:0009753 )
response to wounding( GO:0009611 )
regulation of defense response( GO:0031347 )
nucleus( GO:0005634 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
grain weight( TO:0000590 )
stem length( TO:0000576 )
flower number( TO:0002736 )
days to heading( TO:0000137 )
spikelet fertility( TO:0000180 )
flag leaf length( TO:0002757 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
grain number( TO:0002759 )
viral disease resistance( TO:0000148 )
flowering time( TO:0002616 )
root length( TO:0000227 )
salt tolerance( TO:0006001 )
phosphorus sensitivity( TO:0000102 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 31, 2023