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Basic Information
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CGSNL Gene Symbol
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TIFY6A
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Gene Symbol Synonym
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OsJAZ9, OsJAZ 3, OsJAZ3, JAZ9, JAZ3, OsTIFY6a
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CGSNL Gene Name
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TIFY GENE 6A
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Gene Name Synonym
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Jasmonate ZIM-domain protein 9, Jasmonate ZIM-domain protein 3, Jasmonate Zim-Domain3
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Protein Name
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TIFY-DOMAIN PROTEIN 6A
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Allele
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osjaz9
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Chromosome No.
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8
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Explanation
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Q6ZJU3. The result of the pull-down assay showed that JA-Ile bound to most combinations of OsCOI2-OsJAZs (OsCOI2-OsJAZ1-13/15) (Okumura et al. 2023). OsJAZ3 in Ye et al. (2009), Yamada et al. 2012, Singh et al. 2015, Wang et al. 2019, Kashihara et al. 2019, Sun et al. 2022. OsJAZ9 in Seo et al. (2011) and in Lee et al. (2913), Um et al. 2018, Okumura et al. 2023. HQ858803. ZIM transcription factor. GO:2000022: regulation of jasmonic acid mediated signaling pathway. GO:1990641: response to iron ion starvation. GO:0120127: response to zinc ion starvation.
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Trait Class
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Vegetative organ - Root
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK103459
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MSU ID
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LOC_Os08g33160.1
LOC_Os08g33160.2
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RAP ID
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Os08g0428400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Okumura T., Kitajima T., Kaji T., Urano H., Matsumoto K., Inagaki H., Miyamoto K., Okada K., Ueda M.
Biosci. Biotechnol. Biochem. 2023 87(10) 1122-1128
Difference in the ligand affinity among redundant plant hormone receptors of rice OsCOI1a/1b/2-OsJAZs.
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Sun B., Shang L., Li Y., Zhang Q., Chu Z., He S., Yang W., Ding X.
Int J Mol Sci 2022 23(9)
Ectopic Expression of OsJAZs Alters Plant Defense and Development.
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Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019 232 180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
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Wang M., Yang D., Ma F., Zhu M., Shi Z., Miao X.
Rice (N Y) 2019 12(1) 9
OsHLH61-OsbHLH96 influences rice defense to brown planthopper through regulating the pathogen-related genes.
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Um T.Y., Lee H.Y., Lee S., Chang S.H., Chung P.J., Oh K.B., Kim J.K., Jang G., Choi Y.D.
Front Plant Sci 2018 9 1866
JASMONATE ZIM-DOMAIN PROTEIN 9 Interacts With Slender Rice 1 to Mediate the Antagonistic Interaction Between Jasmonic and Gibberellic Acid Signals in Rice.
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Singh A.P., Pandey B.K., Deveshwar P., Narnoliya L., Parida S.K., Giri J.
Front Plant Sci 2015 6 975
JAZ Repressors: Potential Involvement in Nutrients Deficiency Response in Rice and Chickpea.
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Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013 8(1) e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
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Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012 53(12) 2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
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Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011 65(6) 907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
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Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009 71(3) 291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
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Yilmaz,A., Nishiyama,M.Y. Jr., Fuentes,B.G., Souza,G.M., Janies,D., Gray,J. and Grotewold,E.
Plant Physiol. 2009 149(1) 171-180
GRASSIUS: a platform for comparative regulatory genomics across the grasses
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cellular response to zinc ion starvation( GO:0034224 )
cellular response to iron ion starvation( GO:0010106 )
cellular response to potassium ion starvation( GO:0051365 )
cellular response to phosphate starvation( GO:0016036 )
response to starvation( GO:0042594 )
cellular response to nitrogen starvation( GO:0006995 )
positive regulation of gibberellic acid mediated signaling( GO:0009939 )
gibberellic acid mediated signaling( GO:0009740 )
jasmonic acid mediated signaling pathway( GO:0009867 )
regulation of defense response( GO:0031347 )
photoperiodism, flowering( GO:0048573 )
nucleus( GO:0005634 )
response to wounding( GO:0009611 )
response to gibberellin stimulus( GO:0009739 )
response to jasmonic acid stimulus( GO:0009753 )
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Trait Ontology
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jasmonic acid sensitivity( TO:0000172 )
gibberellic acid sensitivity( TO:0000166 )
flowering time( TO:0002616 )
root length( TO:0000227 )
nitrogen sensitivity( TO:0000011 )
phosphorus sensitivity( TO:0000102 )
potassium sensitivity( TO:0000008 )
iron sensitivity( TO:0000224 )
zinc sensitivity( TO:0000351 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Mar 17, 2025
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