Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TIFY6B
Gene Symbol Synonym OsJAZ8, JAZ8, OsJAZ 4, OsJAZ4, JAZ4, OsTIFY6b, OsJAZ4-2, JAZ4-2. OsJAZ3, JAZ3
Gene Name Synonym Jasmonate ZIM-domain protein 8, Jasmonate ZIM-domain protein 4.
Chromosome No. 9
Explanation Q6ES51. OsJAZ4 in Ye et al. (2009) and in Yamada et al. (2012), Kashihara et al. 2019, Li et al. 2021, Sun et al. 2022. OsJAZ4-2 (LOC_Os09g23660.2) in Sun et al. 2022. OsJAZ8 in Seo et al. (2011) and Lee et al. (2013), Um et al. 2018, Li et al. 2019. OsJAZ3 in Zhang et al. 2023. GO:2000022: regulation of jasmonic acid mediated signaling pathway.
Trait Class Tolerance and resistance - Stress tolerance
Reproductive organ - Heading date
Vegetative organ - Root
Tolerance and resistance - Disease resistance
cDNA Accession No. AK065170
MSU ID LOC_Os09g23650.1
RAP ID Os09g0401300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Zhang Y., Zhang Q., Guo M., Wang X., Li T., Wu Q., Li L., Yi K., Ruan W.
J Integr Plant Biol 2023   
NIGT1 represses plant growth and mitigates phosphate starvation signaling to balance the growth response tradeoff in rice.
Sun B., Shang L., Li Y., Zhang Q., Chu Z., He S., Yang W., Ding X.
Int J Mol Sci 2022  23(9) 
Ectopic Expression of OsJAZs Alters Plant Defense and Development.
Li L., Zhang H., Chen C., Huang H., Tan X., Wei Z., Li J., Yan F., Zhang C., Chen J., Sun Z.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(11) 
A class of independently evolved transcriptional repressors in plant RNA viruses facilitates viral infection and vector feeding.
Hughes P.W.
Plant Cell 2020  32(9)  2669-2670
OsGSK2 Integrates Jasmonic Acid and Brassinosteroid Signaling in Rice.
He Y., Hong G., Zhang H., Tan X., Li L., Kong Y., Sang T., Xie K., Wei J., Li J., Yan F., Wang P., Tong H., Chu C., Chen J., Sun Z.
Plant Cell 2020  32(9)  2806-2822
The OsGSK2 Kinase Integrates Brassinosteroid and Jasmonic Acid Signaling by Interacting with OsJAZ4.
Li B., Sun S., Gao X., Wu M., Deng Y., Zhang Q., Li X., Xiao J., Ke Y., Wang S.
Rice (N Y) 2019  12(1)  51
Overexpression a "fruit-weight 2.2-like" gene OsFWL5 improves rice resistance.
Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019  232  180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
Um T.Y., Lee H.Y., Lee S., Chang S.H., Chung P.J., Oh K.B., Kim J.K., Jang G., Choi Y.D.
Front Plant Sci 2018  9  1866
JASMONATE ZIM-DOMAIN PROTEIN 9 Interacts With Slender Rice 1 to Mediate the Antagonistic Interaction Between Jasmonic and Gibberellic Acid Signals in Rice.
Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013  8(1)  e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012  53(12)  2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011  65(6)  907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009  71(3)  291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
TextPresso Search Search textpresso for TIFY6B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology defense response to bacterium( GO:0042742 )
photoperiodism, flowering( GO:0048573 )
defense response to virus( GO:0051607 )
response to jasmonic acid stimulus( GO:0009753 )
jasmonic acid mediated signaling pathway( GO:0009867 )
cytoplasm( GO:0005737 )
nucleus( GO:0005634 )
response to wounding( GO:0009611 )
regulation of defense response( GO:0031347 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
viral disease resistance( TO:0000148 )
flowering time( TO:0002616 )
root length( TO:0000227 )
bacterial disease resistance( TO:0000315 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Oct 13, 2023