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Basic Information
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CGSNL Gene Symbol
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TIFY10A
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Gene Symbol Synonym
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OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A
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CGSNL Gene Name
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TIFY GENE 10A
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Gene Name Synonym
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Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6
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Protein Name
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TIFY-DOMAIN PROTEIN 5
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Allele
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Osjaz6
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Chromosome No.
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3
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Explanation
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Q84R94. The result of the pull-down assay showed that JA-Ile bound to most combinations of OsCOI2-OsJAZs (OsCOI2-OsJAZ1-13/15) (Okumura et al. 2023). OsJAZ6 in Ye et al. (2009), Singh et al. 2015, Kashihara et al. 2019, Gao et al. 2022, Sun et al. 2022, Mehra et al. 2022, He et al. 2023, Lu et al. 2025. OsJAZ5 in Seo et al. (2011), Shimizu et al. 2013 and Lee et al. (2013), Okumura et al. 2023. AK287757 in Yamada et al. (2012). GO:2000022: regulation of jasmonic acid mediated signaling pathway. GO:1990641: response to iron ion starvation. GO:0120127: response to zinc ion starvation.
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Trait Class
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Character as QTL - Germination
Tolerance and resistance - Stress tolerance
Tolerance and resistance - Disease resistance
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Heading date
Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits
Character as QTL - Yield and productivity
Vegetative organ - Root
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK061842
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MSU ID
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LOC_Os03g28940.1
LOC_Os03g28940.2
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RAP ID
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Os03g0402800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
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RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Lu M., He Q., Wang G., Fan Q., Yan W., Gu K., Yang Z., Du J., Xie K., Li L., Zhang H., Chen J., Sun Z., Li Y.
Plant Biotechnol. J. 2025 23(10) 4602-4617
JA-responsive R2R3-type MYB transcription factor osmyb4p confers broad-spectrum antiviral immunity in rice.
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Okumura T., Kitajima T., Kaji T., Urano H., Matsumoto K., Inagaki H., Miyamoto K., Okada K., Ueda M.
Biosci. Biotechnol. Biochem. 2023 87(10) 1122-1128
Difference in the ligand affinity among redundant plant hormone receptors of rice OsCOI1a/1b/2-OsJAZs.
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He Y., Sun S., Zhao J., Huang Z., Peng L., Huang C., Tang Z., Huang Q., Wang Z.
Nat Commun 2023 14(1) 2296
UDP-glucosyltransferase OsUGT75A promotes submergence tolerance during rice seed germination.
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Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022 23(2)
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
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Mehra P., Pandey B.K., Verma L., Prusty A., Singh A.P., Sharma S., Malik N., Bennett M.J., Parida S.K., Giri J., Tyagi A.K.
Plant Direct 2022 6(5) e401
<i>OsJAZ11</i> regulates spikelet and seed development in rice.
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Sun B., Shang L., Li Y., Zhang Q., Chu Z., He S., Yang W., Ding X.
Int J Mol Sci 2022 23(9)
Ectopic Expression of OsJAZs Alters Plant Defense and Development.
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Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019 232 180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
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Ahmed M.M.S., Ji W., Wang M., Bian S., Xu M., Wang W., Zhang J., Xu Z., Yu M., Liu Q., Zhang C., Zhang H., Tang S., Gu M., Yu H.
Gene 2017
Transcriptional changes of rice in response to rice black-streaked dwarf virus.
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Hakata M., Muramatsu M., Nakamura H., Hara N., Kishimoto M., Iida-Okada K., Kajikawa M., Imai-Toki N., Toki S., Nagamura Y., Yamakawa H., Ichikawa H.
Biosci. Biotechnol. Biochem. 2017 81(5) 906-913
Overexpression of TIFY genes promotes plant growth in rice through jasmonate signaling.
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Singh A.P., Pandey B.K., Deveshwar P., Narnoliya L., Parida S.K., Giri J.
Front Plant Sci 2015 6 975
JAZ Repressors: Potential Involvement in Nutrients Deficiency Response in Rice and Chickpea.
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Shimizu T., Miyamoto K., Miyamoto K., Minami E., Nishizawa Y., Iino M., Nojiri H., Yamane H., Okada K.
Biosci. Biotechnol. Biochem. 2013 77(7) 1556-64
OsJAR1 Contributes Mainly to Biosynthesis of the Stress-Induced Jasmonoyl-Isoleucine Involved in Defense Responses in Rice.
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Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013 8(1) e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
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Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012 53(12) 2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
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Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011 65(6) 907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
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Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009 71(3) 291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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cellular response to zinc ion starvation( GO:0034224 )
cellular response to iron ion starvation( GO:0010106 )
cellular response to potassium ion starvation( GO:0051365 )
cellular response to phosphate starvation( GO:0016036 )
response to starvation( GO:0042594 )
cellular response to nitrogen starvation( GO:0006995 )
positive regulation of seed germination( GO:0010030 )
seed germination( GO:0009845 )
defense response to bacterium( GO:0042742 )
response to jasmonic acid stimulus( GO:0009753 )
response to wounding( GO:0009611 )
defense response to virus( GO:0051607 )
regulation of defense response( GO:0031347 )
nucleus( GO:0005634 )
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Trait Ontology
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jasmonic acid sensitivity( TO:0000172 )
viral disease resistance( TO:0000148 )
black streak dwarf virus resistance( TO:0000020 )
grain weight( TO:0000590 )
stem length( TO:0000576 )
flower number( TO:0002736 )
days to heading( TO:0000137 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
grain number( TO:0002759 )
flag leaf length( TO:0002757 )
root length( TO:0000227 )
bacterial disease resistance( TO:0000315 )
coleoptile length( TO:0001007 )
nitrogen sensitivity( TO:0000011 )
phosphorus sensitivity( TO:0000102 )
potassium sensitivity( TO:0000008 )
iron sensitivity( TO:0000224 )
zinc sensitivity( TO:0000351 )
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Plant Ontology
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root( PO:0009005 )
0 seed germination stage( PO:0007057 )
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Related Strains
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Phenotype images
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Last updated
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Nov 18, 2025
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Update info.