Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TIFY10A
Gene Symbol Synonym OsJAZ5, JAZ5, JAZ6, OsJAZ6, OsTIFY10A
CGSNL Gene Name TIFY GENE 10A
Gene Name Synonym Jasmonate ZIM-domain protein 5, Jasmonate ZIM-domain protein 6
Protein Name TIFY-DOMAIN PROTEIN 5
Allele
Chromosome No. 3
Explanation Q84R94. OsJAZ6 in Ye et al. (2009), Kashihara et al. 2019, Gao et al. 2022. OsJAZ5 in Seo et al. (2011), Shimizu et al. 2013 and Lee et al. (2013). AK287757 in Yamada et al. (2012). GO:2000022: regulation of jasmonic acid mediated signaling pathway.
Trait Class Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Heading date
Reproductive organ - panicle
Seed - Morphological traits
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK061842
MSU ID LOC_Os03g28940.1
LOC_Os03g28940.2
RAP ID Os03g0402800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Gao Y., Xiang X., Zhang Y., Cao Y., Wang B., Zhang Y., Wang C., Jiang M., Duan W., Chen D., Zhan X., Cheng S., Liu Q., Cao L.
Int J Mol Sci 2022  23(2) 
Disruption of <i>OsPHD1</i>, Encoding a UDP-glucose epimerase, Causes JA Accumulation and Enhanced Bacterial Blight Resistance in Rice.
Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019  232  180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
Ahmed M.M.S., Ji W., Wang M., Bian S., Xu M., Wang W., Zhang J., Xu Z., Yu M., Liu Q., Zhang C., Zhang H., Tang S., Gu M., Yu H.
Gene 2017   
Transcriptional changes of rice in response to rice black-streaked dwarf virus.
Hakata M., Muramatsu M., Nakamura H., Hara N., Kishimoto M., Iida-Okada K., Kajikawa M., Imai-Toki N., Toki S., Nagamura Y., Yamakawa H., Ichikawa H.
Biosci. Biotechnol. Biochem. 2017  81(5)  906-913
Overexpression of TIFY genes promotes plant growth in rice through jasmonate signaling.
Shimizu T., Miyamoto K., Miyamoto K., Minami E., Nishizawa Y., Iino M., Nojiri H., Yamane H., Okada K.
Biosci. Biotechnol. Biochem. 2013  77(7)  1556-64
OsJAR1 Contributes Mainly to Biosynthesis of the Stress-Induced Jasmonoyl-Isoleucine Involved in Defense Responses in Rice.
Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013  8(1)  e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012  53(12)  2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011  65(6)  907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009  71(3)  291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
TextPresso Search Search textpresso for TIFY10A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to jasmonic acid stimulus( GO:0009753 )
response to wounding( GO:0009611 )
defense response to virus( GO:0051607 )
regulation of defense response( GO:0031347 )
nucleus( GO:0005634 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
viral disease resistance( TO:0000148 )
black streak dwarf virus resistance( TO:0000020 )
grain weight( TO:0000590 )
stem length( TO:0000576 )
flower number( TO:0002736 )
days to heading( TO:0000137 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
grain number( TO:0002759 )
flag leaf length( TO:0002757 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 13, 2022


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