Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol TIFY11B
Gene Symbol Synonym OsJAZ4, JAZ4, OsJAZ 10, OsJAZ10, JAZ10, OsTIFY11b
CGSNL Gene Name TIFY GENE 11B
Gene Name Synonym Jasmonate ZIM-domain protein 4, Jasmonate ZIM-domain protein 10
Protein Name TIFY-DOMAIN PROTEIN 11B
Allele
Chromosome No. 3
Explanation OsJAZ10 in Ye et al. (2009), Yamada et al. (2012), Uji et al. 2016. OsJAZ4 in Seo et al.(2011), Shimizu et al. 2013, Lee et al. (2013), Wang et al. 2019, Kashihara et al. 2019. Overexpression of TIFY11b increases grain size (Hakata et al. 2012). GO:2000022: regulation of jasmonic acid mediated signaling pathway.
Trait Class Seed
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Heading date
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - panicle
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK120087
AK067971
MSU ID LOC_Os03g08330.1
RAP ID Os03g0181100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Kashihara K., Onohata T., Okamoto Y., Uji Y., Mochizuki S., Akimitsu K., Gomi K.
J. Plant Physiol. 2019  232  180-187
Overexpression of OsNINJA1 negatively affects a part of OsMYC2-mediated abiotic and biotic responses in rice.
Wang J., Zhang Q., Wang Y., Huang J., Luo N., Wei S., Jin J.
Rice (N Y) 2019  12(1)  6
Analysing the rice young panicle transcriptome reveals the gene regulatory network controlled by TRIANGULAR HULL1.
Ogawa S., Kawahara-Miki R., Miyamoto K., Yamane H., Nojiri H., Tsujii Y., Okada K.
Biochem. Biophys. Res. Commun. 2017  486(3)  796-803
OsMYC2 mediates numerous defence-related transcriptional changes via jasmonic acid signalling in rice.
Hakata M., Muramatsu M., Nakamura H., Hara N., Kishimoto M., Iida-Okada K., Kajikawa M., Imai-Toki N., Toki S., Nagamura Y., Yamakawa H., Ichikawa H.
Biosci. Biotechnol. Biochem. 2017  81(5)  906-913
Overexpression of TIFY genes promotes plant growth in rice through jasmonate signaling.
Uji Y., Taniguchi S., Tamaoki D., Shishido H., Akimitsu K., Gomi K.
Plant Cell Physiol. 2016   
Overexpression of OsMYC2 Results in the Up-Regulation of Early JA-Rresponsive Genes and Bacterial Blight Resistance in Rice.
Shimizu T., Miyamoto K., Miyamoto K., Minami E., Nishizawa Y., Iino M., Nojiri H., Yamane H., Okada K.
Biosci. Biotechnol. Biochem. 2013  77(7)  1556-64
OsJAR1 Contributes Mainly to Biosynthesis of the Stress-Induced Jasmonoyl-Isoleucine Involved in Defense Responses in Rice.
Lee H.Y., Seo J.S., Cho J.H., Jung H., Kim J.K., Lee J.S., Rhee S., Do Choi Y.
PLoS ONE 2013  8(1)  e52802
Oryza sativa COI homologues restore jasmonate signal transduction in Arabidopsis COI1-1 mutants.
Hakata M., Kuroda M., Ohsumi A., Hirose T., Nakamura H., Muramatsu M., Ichikawa H., Yamakawa H.
Biosci. Biotechnol. Biochem. 2012  76(11)  2129-34
Overexpression of a rice TIFY gene increases grain size through enhanced accumulation of carbohydrates in the stem.
Yamada S., Kano A., Tamaoki D., Miyamoto A., Shishido H., Miyoshi S., Taniguchi S., Akimitsu K., Gomi K.
Plant Cell Physiol. 2012  53(12)  2060-72
Involvement of OsJAZ8 in jasmonate-induced resistance to bacterial blight in rice.
Seo J.S. , Joo J. , Kim M.J. , Kim Y.K. , Nahm B.H. , Song S.I. , Cheong J.J. , Lee J.S. , Kim J.K. , Choi Y.D.
Plant J. 2011  65(6)  907-21
OsbHLH148, a basic helix-loop-helix protein, interacts with OsJAZ proteins in a jasmonate signaling pathway leading to drought tolerance in rice.
Ye H,Du H,Tang N,Li X,Xiong L
Plant Mol. Biol. 2009  71(3)  291-305
Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice.
TextPresso Search Search textpresso for TIFY11B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to jasmonic acid stimulus( GO:0009753 )
response to wounding( GO:0009611 )
regulation of defense response( GO:0031347 )
nucleus( GO:0005634 )
Trait Ontology jasmonic acid sensitivity( TO:0000172 )
grain weight( TO:0000590 )
grain size( TO:0000397 )
stem length( TO:0000576 )
flower number( TO:0002736 )
days to heading( TO:0000137 )
spikelet fertility( TO:0000180 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
grain number( TO:0002759 )
flag leaf length( TO:0002757 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 19, 2019


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