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Basic Information
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CGSNL Gene Symbol
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PITA
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Gene Symbol Synonym
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Pita, Pita (sl, Pi4a, Pi-ta), Pita2, Pi4a, Pita, Pi-ta, Pita-2, Pi-ta2, Pi-4(t), Pi-4, Pi4, Pi-4a(t), OsTRXh6, TRXh6, OsTrx30, Trx30
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CGSNL Gene Name
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PYRICULARIA ORYZAE RESISTANCE TA
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Gene Name Synonym
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Pyricularia oryzae resistance-ta, Magnaporthe grisea resistance-ta, Blast resistance ta, Thioredoxin H-type 6, H-type Thioredoxin 6, Thioredoxin 30
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Protein Name
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Allele
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Pi ta-2, Pi ta-n, Pi4a(t), Pi4b(t), Pi-4a(t), Pi-4b(t), Pita Tadukan, Pita Konibora, Pita Bizor, Pita Olatifolia, Pita lati
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Chromosome No.
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12
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Explanation
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Original line (Pita) is Taducan (Indica). Original line (Pita2) is Shimokita (Japonica). AF207842, AY196754. EU770205-EU770220: Oryza sativa, O. glaberrima, O. rufipogon, O. nivara, and O. barthii, and O. officinalis. EU346955-EU347006: Oryza rufipogon. AL772419, AB364239-AB364242, AB364479-AB364497: Oryza rufipogon and its related species. GQ918334-GQ918489 and GQ984160. GQ918334-GQ918489 (O.sativa and other wild rice species). GU269201-GU269204. KF891315, JN564634 (O. latifolia). AY885738-AY885768 and DQ374698-DQ374725 (O. sativa and other wild rice species, partial cds). R Gene present in both Nipponbare and 9311. EF533785-EF533786 (partial cds). a target of osa-miR166 (osa-miR166k-3p and osa-miR166l-3p). GRO:0007044; 06-heading stage ; GRO:0007042; 08-dough stage ; GRO:0007046; 07-milk stage ; GRO:0007048; 04-stem elongation stage ; GRO:0007047; 02-seedling ; GRO:0007049; 03-tillering stage ; GRO:0007148; 05-booting stage ; GRO:0007045; 09-mature grain stage.
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Trait Class
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Tolerance and resistance - Disease resistance
Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK067534
AK071926
AK066558
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MSU ID
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LOC_Os12g18360.1
LOC_Os12g18360.2
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RAP ID
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Os12g0281300
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Links
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Oryzabase Chromosome View
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IRGSP 1.0
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Build5
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RAP-DB
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IRGSP 1.0
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Build5
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Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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Link to INSD Accession List
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Map
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Locate(cM)
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50.4
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Link map
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Classical linkage map
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References
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Li M., Li W., Zhao M., Li Z., Wang G.L., Liu W., Liang C.
BMC Genomics 2023 24(1) 643
Transcriptome analysis reveals a lncRNA-miRNA-mRNA regulatory network in OsRpp30-mediated disease resistance in rice.
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Li Y., Liu P., Mei L., Jiang G., Lv Q., Zhai W., Li C.
Front Plant Sci 2022 13 1065253
Knockout of a papain-like cysteine protease gene <i>OCP</i> enhances blast resistance in rice.
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Zhao H., Wang X., Jia Y., Minkenberg B., Wheatley M., Fan J., Jia M.H., Famoso A., Edwards J.D., Wamishe Y., Valent B., Wang G.L., Yang Y.
Nat Commun 2018 9(1) 2039
The rice blast resistance gene Ptr encodes an atypical protein required for broad-spectrum disease resistance.
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Yu H., Shahid M.Q., Li R., Li W., Liu W., Ghouri F., Liu X.
Plant Molecular Biology Reporter 2018 36(4) 618-630
Genome-Wide Analysis of Genetic Variations and the Detection of Rich Variants of NBS-LRR Encoding Genes in Common Wild Rice Lines.
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Yadav M.K., S A., Ngangkham U., Shubudhi H.N., Bag M.K., Adak T., Munda S., Samantaray S., Jena M.
PLoS ONE 2017 12(4) e0176236
Use of molecular markers in identification and characterization of resistance to rice blast in India.
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Chen S.a b c, Su J.b c, Han J.b c, Wang W.b c, Wang C.b c, Yang J.b c, Zeng L.b c, Wang X.a, Zhu X.b c, Yang C.a
Euphytica 2014 195 209-216
Resistance spectrum assay and fine mapping of the blast resistance gene from a rice experimental line, IRBLta2-Re
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Imam J.a b, Alam S.a, Mandal N.P.a, Variar M.a, Shukla P.b
Euphytica 2014 196 199-211
Molecular screening for identification of blast resistance genes in North East and Eastern Indian rice germplasm (Oryza sativa L.) with PCR based makers
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Ramkumar G., Madhav M.S., Rama Devi SJ., Manimaran P., Mohan K.M., Prasad M.S., Balachandran S.M., Neeraja C.N., Sundaram R.M., Viraktamath B.C.
Gene 2014 546(2) 250-6
Nucleotide diversity of Pita, a major blast resistance gene and identification of its minimal promoter.
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Miah G., Rafii M.Y., R .Ismail M., B. Puteh A., A. Rahim H., Asfaliza R., A. Latif M.
Mol. Biol. Rep. 2013 40(3) 2369-88
Blast resistance in rice: a review of conventional breeding to molecular approaches
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Gupta S.K., Rai A.K., Kanwar S.S., Chand D., Singh N.K., Sharma T.R.
J. Exp. Bot. 2012 63(2) 757-72
The single functional blast resistance gene Pi54 activates a complex defence mechanism in rice.
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Luo,S., Zhang,Y., Hu,Q., Chen,J., Li,K., Lu,C., Liu,H., Wang,W. and Kuang,H.
Plant Physiol. 2012 159(1) 197-210
Dynamic Nucleotide-Binding-Site and Leucine-Rich-Repeat- encoding Genes in the Grass Family
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Mithrasena Y.J.P.K., Wijesundera W.S.S., Wijesundera R.L.C., Wimalasiri D.C., Priyanthi R.P.N.
Rice Science 2012 19 241-246
Pathogenic and Genetic Diversity of Magneporthe oryzae Populations from Sri Lanka
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Sharma T.R., Rai A.K., Gupta S.K., Vijayan J., Devanna B.N., Ray S.
Agric Res 2012 1 37-52
Rice Blast Management Through Host-Plant Resistance: Retrospect and Prospects
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Zhang C.J., Zhao B.C., Ge W.N., Zhang Y.F., Song Y., Sun D.Y., Guo Y.
Plant Physiol. 2011 157(4) 1884-99
An Apoplastic H-Type Thioredoxin Is Involved in the Stress Response through Regulation of the Apoplastic Reactive Oxygen Species in Rice.
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Lee S., Jia Y., Jia M., Gealy D.R., Olsen K.M., Caicedo A.L.
PLoS ONE 2011 6(10) e26260
Molecular evolution of the rice blast resistance gene Pi-ta in invasive weedy rice in the USA.
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Ramkumar,G., Biswal,A.K., Mohan,K.M., Sakthivel,K., Sivaranjani,A.K.P., Neeraja,C.N., Ram,T., Balachandran,S.M., Sundaram,R.M., Prasad,M.S., Rani,N.S., Viraktamath,B.C. and Madhav,M.S.
Int Rice Res Notes 2010 35 1-6
Identification of novel alleles of rice blast resistance genes Pik h and Pita through allele mining
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Xie G., Kato H., Sasaki K., Imai R.
FEBS Lett. 2009 583(17) 2734-8
A cold-induced thioredoxin h of rice, OsTrx23, negatively regulates kinase activities of OsMPK3 and OsMPK6 in vitro.
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Costanzo S., Jia Y.
Plant Sci. 2009 177(5) 468-478
Alternatively spliced transcripts of Pi-ta blast resistance gene in Oryza sativa
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Lee S,Costanzo S,Jia Y,Olsen KM,Caicedo AL
Genetics 2009 183(4) 1315-25
Evolutionary dynamics of the genomic region around the blast resistance gene Pi-ta in AA genome oryza species.
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Jia Y., Lee F.N., McClung A.
Plant Dis. 2009 93 639-644
Determination of Resistance Spectra of the Pi-ta and Pi-k Genes to U.S. Races of Magnaporthe oryzae Causing Rice Blast in a Recombinant Inbred Line Population
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Koide Y., Kobayashi N., Xu D., Fukuta Y.
JARQ 2009 43 255-280
Resistance Genes and Selection DNA Markers for Blast Disease in Rice (Oryza sativa L.)
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Yoshida,K. and Miyashita,N.T.
Genes Genet. Syst. 2009 84(2) 121-136
DNA polymorphism in the blast disease resistance gene Pita of the wild rice Oryza rufipogon and its related species
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Nuruzzaman M,Gupta M,Zhang C,Wang L,Xie W,Xiong L,Zhang Q,Lian X
Mol. Genet. Genomics 2008 280 139-51
Sequence and expression analysis of the thioredoxin protein gene family in rice.
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Jia Y,Martin R
Mol. Plant Microbe Interact. 2008 21 396-403
Identification of a new locus, Ptr(t), required for rice blast resistance gene Pi-ta-mediated resistance.
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Ballini E., Morel J.B., Droc G., Price A., Courtois B., Notteghem J.L., Tharreau D.
Mol. Plant Microbe Interact. 2008 21(7) 859-68
A genome-wide meta-analysis of rice blast resistance genes and quantitative trait loci provides new insights into partial and complete resistance.
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Huang,C.L., Hwang,S.Y., Chiang,Y.C. and Lin,T.P.
Genetics 2008 179(3) 1527-1538
Molecular Evolution of Pi-ta Gene Resistance to Rice Blast in Wild Rice (Oryza rufipogon)
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Wang,X., Jia,Y., Shu,Q.Y. and Wu,D.
Phytopathology 2008 98(12) 1305-1311
Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relatives
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Soon-Wook Kwon, Young-Chan Cho, Yeon-Gyu Kim, Jung-Pil Suh, Ji-Ung Jeung, Jae-Hwan Roh, Sang-Kyu Lee, Jong-Seong Jeon, Sae-Jun Yang, Young-Tae Lee
Mol. Cells 2008 25(3) 407-16
Development of near-isogenic Japonica rice lines with enhanced resistance to Magnaporthe grisea.
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Wang Z., Jia Y., Rutger J.N., Xia Y.
Plant Breeding 2007 126 36-42
Rapid survey for presence of a blast resistance gene Pi-ta in rice cultivars using the dominant DNA markers derived from portions of the Pi-ta gene
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Ding,J., Araki,H., Wang,Q., Zhang,P., Yang,S., Chen,J.Q. and Tian,D.
BMC Genomics 2007 8(1) 154
Highly asymmetric rice genomes
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Cho Y.C., Kwon S.W., Choi I.S., Lee S.K., Jeon J.S., Oh M.K., Roh J.H., Hwang H.G., Yang S.J., Kim Y.G.
J. Crop Sci. Biotech. 2007 10 265-276
Identification of Major Blast Resistance Genes in Korean Rice Varieties (Oryza sativa L.) Using Molecular Markers
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Liu X,Yang Q,Lin F,Hua L,Wang C,Wang L,Pan Q
Mol. Genet. Genomics 2007 278 403-10
Identification and fine mapping of Pi39(t), a major gene conferring the broad-spectrum resistance to Magnaporthe oryzae.
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Tang,T., Lu,J., Huang,J., He,J., McCouch,S.R., Shen,Y., Kai,Z., Purugganan,M.D., Shi,S. and Wu,C.-I.
PLoS Genet. 2 (11), e199 REMARK Publication Status: Online-Only 2006 2(11)
Genomic Variation in Rice: Genesis of Highly Polymorphic Linkage Blocks during Domestication
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Hayashi K, Yoshida H, Ashikawa I.
Theor. Appl. Genet. 2006 113(2) 251-260
Development of PCR-based allele-specific and InDel marker sets for nine rice blast resistance genes.
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Jia,Y., Wang,Z., Fjellstrom,R.G., Moldenhauer,K.A., Azam,M.A., Correll,J., Lee,F.N., Xia,Y. and Rutger,J.N.
Phytopathology 2004 94(3) 296-301
Rice Pi-ta gene Confers Resistance to the Major Pathotypes of the Rice Blast Fungus in the United States
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Robert Fjellstrom, Concetta A. Conaway-Bormans, Anna M. McClung, Marco A. Marchetti, A. obert Shank and William D. Park
Crop Sci. 2004 44 1790-1798
Development of DNA Markers Suitable for Marker Assisted Selection of Three Pi Genes Conferring esistance to Multiple Pyricularia grisea Pathotypes
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Ebron L A, Fukuta Y, Imbe T, Kato H, Yanoria JMT, Tsunematsu H, Khush GS, Yokoo M.
Breeding Science 2004 54(4) 381-387
Estimation of Genes in Blast Resistance in Elite Indica-type Rice (Oryza sativa L.) Varieties-bred at the International Rice Research Institute
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Sallaud, C., M. Lorieux, E. Roumen, D Tharreau, R. Berruyer, P. Svestasrani, O. Garsmeur, A. Ghesquiere, J.L. Nottenghem
Theor. Appl. Genet. 2003 106 794-803
Identification of five new blast resistance genes in the highly blast-resistant rice variety IR64 using a QTL mapping strategy.
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Jia Y., Bryan G.T., Farrall L., Valent B.
Phytopathology 2003 93(11) 1452-9
Natural Variation at the Pi-ta Rice Blast Resistance Locus.
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Muralidharan, K., D. Krishnaveni, G.S. Laha, C.S. Reddy, M. Srinivasprasad and R. Sridhar
RGN 2003 20 94-96
Evaluation of blast resistance genes in India.
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Jia Y., Wang Z., Singh P.
Crop Sci. 2002 42 2145-2149
Development of Dominant Rice Blast Pi-ta Resistance Gene Markers
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Jia Y., Correll J.C., Lee F.N., Eizenga G.C., Yang Y., Gealy D.R., Valent B., Zhu Q.
Phytopathology 2001 91 (Suppl. 6) 44-44
Understanding molecular interaction mechanisms of the Pi-ta rice resistance genes and the rice blast pathogen.
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Rutger J.N., Mackill D.J.
Rice Genetics, IV. IRRI, Manila, Philippines 2001 27-38
Application of Mendelian genetics in rice breeding
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Orback, M.J., L. Farrall, J.A. Sweigard, F.G. Chumley and B. Valent
Plant Cell 2000 12 2019-2032
A telomeric avirulence gene determines efficacy for the rice blast resistance gene Pi-ta.
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Hittalmani, S., A. Parco, T.V. Mew, R.S. Zeigler and N. Huang
Theor. Appl. Genet. 2000 100 1121-1128
Fine mapping and DNA marker-assisted pyramiding of the three major genes for blast resistance in rice.
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Bryan,G.T., Wu,K.S., Farrall,L., Jia,Y., Hershey,H.P., McAdams,S.A., Faulk,K.N., Donaldson,G.K., Tarchini,R. and Valent,B.
Plant Cell 2000 12(11) 2033-2045
tA single amino acid difference distinguishes resistant and susceptible alleles of the rice blast resistance gene Pi-ta.
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Hayashi N., Ando I., Imbe T.
Phytopathology 1998 88(8) 822-7
Identification of a new resistance gene to a chinese blast fungus isolate in the Japanese rice cultivar aichi asahi.
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Rybka, K., M. Miyamoto, I. Ando, A. Saito and S. Kawasaki
Mol. Plant Microbe Interact. 1997 10 517-524.
High resolution mapping of the indica-derived rice blast resistance genes II. Pi-ta2 and Pi-ta and a consideration of their origin.
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Nakamura, S., S. Asakawa, N. Ohmido, K. Fukui, N. Shimizu and S. Kawasaki
Mol. Gen. Genet. 1997 254 611-620.
Construction of an 800-kb contig in the near-centromeric region of the rice blast resistance gene Pi-ta2 using a highly representative rice BAC library.
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Nakamura, H., Y. Toukairin, S. Hidaka, S. Ejiri and K. Tsutsumi
Breeding Science 1996 46(Suppl. 2) 326
Genomic polymorphysm at the cytoplasmic aldolase-encoding loci and their different expression in rice varieties.
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Inukai, T., R.J. Nelson, R.S. Zeigler, S. Sarkarung, D.J. Mackill, J.M. Bonman, I. Takamure and T. Kinoshita
Rice Genetics III. IRRI, Manila, Philippines. 1996 447-450.
Genetic analysis of blast resistance in tropical rice cultivars using near-isogenic lines.
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Yu, Z.H., D.J. Mackill, J.M. Bonman, S.R. McCouch, E. Guiderdoni, J.L. Notteghem and S.D. Tanksley
Theor. Appl. Genet. 1996 93 859-863.
Molecular mapping of genes for resistance to rice blast (Pyricularia grisea Sacc.).
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Kiyosawa S.
Japan. J. Breeding 1996 16 243-250
Studieis on inheritance of resistance of rice varieties to blast 3. Inheritance of resistance of a rice variety Pi No.1 to the blast fungus
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Inukai, T., R.S. Zeigler, S. Sarkarung, M. Bronson, L.V. Dung, T. Kinoshita and R.J. Nelson
Theor. Appl. Genet. 1996 93 560-567.
Development of pre-isogenic lines for rice blast-resistance by marker-aided selection from a recombinant inbred population.
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Kawasaki, S., K. Rybka, M. Miyamoto, Y. Tanaka, M. Kataoka, A. Saito and I. Ando
Rice Genetics III. IRRI, Manila, Philippines. 1996 675-680.
Positional cloning of rice blast resistance genes.
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Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994 138 1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
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Rybka, K., M. Miyamoto, M. Kataoka, I. Ando and S. Kawasaki
Breeding Science 1994 44(Suppl. 2) 190
Improved high-resolution mapping of rice-blast resistance genes.
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Miyamoto, M., K. Rybka, Y. Tanaka, M. Kataoka, I. Ando and S. Kawasaki
Breeding Science 1994 44(Suppl. 2) 191
Physical mapping of the rice blast resistance genes by using restriction enzymes.
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Mew, T.V., A.S. Parco, S. Hittalmani, T. Inukai, R. Nelson, R.S. Zeigler and N. Huang
RGN 1994 11 126-128.
Fine-mapping of major genes for blast resistance in rice.
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Kinoshita T., Inukai T., Toriyama K.
RGN 1994 11 16-17
IV. Reports from coordinators 1) Gene symbols for blast resistance newly revised
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Inukai, T., R.J. Nelson, R.S. Zeigler, S. Sarkarung, D.J. Mackill, J.M. Bonman, I. Takamure and T. Kinoshita
Phytopathology 1994 84 1278-1283.
Allelism of blast resistance genes in near-isogenic lines of rice.
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Satoh, H., T. Itoh, M.Y. Son and T. Kumamaru
Japan. J. Breed. 1993 43(Suppl. 1) 139
Chromosomal location of a spontaneous mutant gene for 57 kDa polypeptides in rice.
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Ise, K.
IRRN 1993 18(2) 14
A close linkage between the blast (bl) resistance gene Pi-ta2 and a marker on chromosome 12 in japonica rice.
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Mackill, D.J. and J.M.Bonman
Phytopathology 1992 82 746-749.
Inheritance of blast resistance in near-isogenic lines of rice.
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Yu, Z.H., D.J. Mackill, J.M. Bonman and S.D. Tanksley
Theor. Appl. Genet. 1991 81(4) 471-476.
Tagging genes for blast resistance in rice via linkage to RFLP markers.
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Imbe, T. and S. Matsumoto
Japan. J. Breed. 1985 35 332-339.
Inheritance of resistance of rice varieties to the blast fungus strains virulent of the variety Reiho.
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Kiyosawa S., Orimoto Y., Iida S.
Japan. J. Breeding 1984 34 322-334
Relationship between frequencies of resistance gene in the host and corresponding virulence gene in the pathogen in rice blast disease
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Kiyosawa, S.
Symposium on Rice Breeding, IRRI, Los Banos, Philippines. 1972 203-225.
Genetics of blast resistance.
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Shinoda, H., K. Toriyama, T. Yunoki, A. Ezuka and Y. Sakurai
Bull. Chugoku Agric. Exp. Stn., Ser.A 1971 20 1-25.
Studies on the varietal resistance of rice to blast. 6. Linkage relationship of blast resistance genes.
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Kiyosawa, S.
Bull. Natl. Inst. Agric. Sci., Ser.D 1970 21 61-71.
Inheritance of a particular sensitivity of the variety Sekiguchi Asahi to pathogens and chemicals and linkage relationship with blast resistance genes.
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Kiyosawa S.
Japan. J. Breeding 1967 17 165-172
Inheritance of resistance of the rice variety Pi No.4 to blast
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TextPresso Search
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Search textpresso for PITA
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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GR:0060627
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Ontologies
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Gene Ontology
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defense response( GO:0006952 )
ADP binding( GO:0043531 )
ATP binding( GO:0005524 )
apoptosis( GO:0006915 )
plastid( GO:0009536 )
response to fungus( GO:0009620 )
glycerol ether metabolic process( GO:0006662 )
electron carrier activity( GO:0009055 )
protein disulfide oxidoreductase activity( GO:0015035 )
electron transport chain( GO:0022900 )
cell redox homeostasis( GO:0045454 )
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Trait Ontology
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stomatal closure time( TO:0000521 )
panicle blast disease resistance( TO:0000477 )
leaf blast disease resistance( TO:0000468 )
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Plant Ontology
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vascular leaf( PO:0009025 )
stem( PO:0009047 )
inflorescence( PO:0009049 )
stem node( PO:0020141 )
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Related Strains
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Phenotype images
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Last updated
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Dec 25, 2023
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