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Basic Information
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CGSNL 遺伝子シンボル
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SODCC2
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遺伝子シンボルシノニム
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Cu/Zn-SOD, Cu/Zn- SOD, OsCu-ZnSOD2, Cu-ZnSOD2, OsSODB, OsSOD3, SodCc2, Os SodCc2, sodB, OsSodB, RSODB, OssodCc1, OsCSD1.1, CSD1.1, OsCDS1, OsSOD3-CU/Zn, SOD3-CU/Zn, CuZnSOD2, Cu/ZnSOD2, OsCu/ZnSOD2, OsCSD1, CSD1, CuZnSOD1, OsCuZnSOD2, OsCSD4, CSD4
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CGSNL 遺伝子名
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CYTOSOLIC SUPEROXIDASE DISMUTASE 2
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遺伝子名シノニム
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Cu/Zn-superoxide dismutase, superoxide dismutase B, copper/zinc-superoxide dismutase, "Cu,Zn superoxide dismutase", cytosolic copper/zinc-superoxide dismutase 2, "Superoxide dismutase (Cu-Zn) 4, cytosolic", Cu-dependent SOD 1.1, cytosolic CuZn SOD 4
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タンパク質名
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CYTOSOLIC SUPEROXIDASE DISMUTASE 2
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対立遺伝子
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染色体番号
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7
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解説
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D01000. P28757. L19434. D22653. MW091044. Superoxide dismutase (Cu-Zn) 4, cytosolic in Sasaki et al. 1994. ROS-scavenging enzyme. OssodCc1 in Wu et al. 2014. miR398a target. targeted by miR398 family members (Qin et al. 2017). Cu/ZnSOD2 in Huang et al. 2018. OsCSD1 in Navarro et al. 2021. OsCSD4 in Sanyal et al. 2022. OsSODB in Xu et al. 2022. GO:0120126: response to copper ion starvation.
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形質クラス
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栄養器官 - 稈
種子 - 生理的な特色 - 休眠性
生化学的性質
耐性、抵抗性 - ストレス耐性
生殖器官 - 穂
QTLの特性 - 収穫と生産性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK243377
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MSU ID
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LOC_Os07g46990.1
LOC_Os07g46990.2
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RAP ID
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Os07g0665200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Zu X., Luo L., Wang Z., Gong J., Yang C., Wang Y., Xu C., Qiao X., Deng X., Song X., Chen C., Tan B.C., Cao X.
Nat Commun 2023 14(1) 6789
A mitochondrial pentatricopeptide repeat protein enhances cold tolerance by modulating mitochondrial superoxide in rice.
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Zhang J., Sun Y., Zhou Z., Zhang Y., Yang Y., Zan X., Li X., Wan J., Gao X., Chen R., Huang Z., Li L., Xu Z.
Sci Rep 2022 12(1) 8385
OsSCL30 overexpression reduces the tolerance of rice seedlings to low temperature, drought and salt.
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Xu Q., Wei Q., Kong Y., Zhu L., Tian W., Huang J., Pan L., Jin Q., Zhang J., Zhu C.
Life (Basel) 2022 12(6)
Unearthing the Alleviatory Mechanisms of Brassinolide in Cold Stress in Rice.
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Sanyal R.P., Prashar V., Jawali N., Sunkar R., Misra H.S., Saini A.
Front Plant Sci 2022 13 864330
Molecular and Biochemical Analysis of Duplicated Cytosolic CuZn Superoxide Dismutases of Rice and <i>in silico</i> Analysis in Plants.
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Navarro B.B., Del Frari BK., Dias PVDC., Lemainski L.E., Mario R.B., Ponte L.R., Goergen A., Tarouco C.P., Neves V.M., Dressler V.L., Fett J.P., Brunetto G., Sperotto R.A., Nicoloso F.T., Ricachenevsky F.K.
Plant Physiol. Biochem. 2021 158 113-124
The copper economy response is partially conserved in rice (Oryza sativa L.).
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Mostofa M.G., Ha C.V., Rahman M.M., Nguyen K.H., Keya S.S., Watanabe Y., Itouga M., Hashem A., Abd Allah EF., Fujita M., Tran L.P.
Antioxidants (Basel) 2021 10(11)
Strigolactones Modulate Cellular Antioxidant Defense Mechanisms to Mitigate Arsenate Toxicity in Rice Shoots.
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Song Y., Jiang M., Zhang H., Li R.
Molecules 2021 26(8)
Zinc Oxide Nanoparticles Alleviate Chilling Stress in Rice (<i>Oryza Sativa</i> L.) by Regulating Antioxidative System and Chilling Response Transcription Factors.
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Xu Y., Wang R., Wang Y., Zhang L., Yao S.
Plant Cell Environ. 2020 43(4) 992-1007
A point mutation in ltt1 enhances cold tolerance at the booting stage in rice.
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Xiong H., Yu J., Miao J., Li J., Zhang H., Wang X., Liu P., Zhao Y., Jiang C., Yin Z., Li Y., Guo Y., Fu B., Wang W., Li Z., Ali J., Li Z.
Plant Physiol. 2018 178(1) 451-467
Natural Variation in <i>OsLG3</i> Increases drought tolerance in Rice by Inducing ROS Scavenging.
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Huang B., Zhang J.M., Chen X.L., Xin X., Yin G.K., He J.J., Lu X.X., Zhou Y.C.
Plant Cell Rep. 2018
Oxidative damage and antioxidative indicators in 48 h germinated rice embryos during the vitrification-cryopreservation procedure.
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Andrés-Bordería A., Andrés F., Garcia-Molina A., Perea-García A., Domingo C., Puig S., Peñarrubia L.
Plant Mol. Biol. 2017
Copper and ectopic expression of the Arabidopsis transport protein COPT1 alter iron homeostasis in rice (Oryza sativa L.).
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Zhang H., Zhang J., Yan J., Gou F., Mao Y., Tang G., Botella J.R., Zhu J.K.
Proc. Natl. Acad. Sci. U.S.A. 2017 114(20) 5277-5282
Short tandem target mimic rice lines uncover functions of miRNAs in regulating important agronomic traits.
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Qin J., Tang Z., Ma X., Meng Y.
Gene 2017
Investigating the regulatory roles of the microRNAs and the Argonaute 1-enriched small RNAs in plant metabolism.
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Rossatto T., do Amaral MN., Benitez L.C., Vighi I.L., Braga E.J.B., de Magalhães Júnior AM., Maia M.A.C., da Silva Pinto L.
Physiol Mol Biol Plants 2017 23(4) 865-875
Gene expression and activity of antioxidant enzymes in rice plants, cv. BRS AG, under saline stress.
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Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017 68(17) 4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
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Zheng L., Zhang C., Shi C., Yang Z., Wang Y., Zhou T., Sun F., Wang H., Zhao S., Qin Q., Qiao R., Ding Z., Wei C., Xie L., Wu J., Li Y.
PLoS Pathog. 2017 13(10) e1006662
Rice stripe virus NS3 protein regulates primary miRNA processing through association with the miRNA biogenesis factor OsDRB1 and facilitates virus infection in rice.
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Khare T., Kumar V., Kishor P.B.
Protoplasma 2014
Na(+) and Cl(-) ions show additive effects under NaCl stress on induction of oxidative stress and the responsive antioxidative defense in rice.
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Wang L., Yu C., Chen C., He C., Zhu Y., Huang W.
Plant Cell Rep. 2014
Identification of rice Di19 family reveals OsDi19-4 involved in drought resistance.
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Suzuki K., Aoki N., Matsumura H., Okamura M., Ohsugi R., Shimono H.
Plant Cell Environ. 2014
Cooling water before panicle initiation increases chilling-induced male sterility and disables chilling-induced expression of genes encoding OsFKBP65 and heat shock proteins in rice spikelets.
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Wu J., Zhu C., Pang J., Zhang X., Yang C., Xia G., Tian Y., He C.
Plant J. 2014
OsLOL1, a C2C2-type zinc finger protein, interacts with OsbZIP58 to promote seed germination through the modulation of GA biosynthesis in Oryza sativa.
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Mahanty S., Kaul T., Pandey P., Reddy R.A., Mallikarjuna G., Reddy C.S., Sopory S.K., Reddy M.K.
Gene 2012 505(2) 309-17
Biochemical and molecular analyses of copper-zinc superoxide dismutase from a C(4) plant Pennisetum glaucum reveals an adaptive role in response to oxidative stress.
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Ruan S.L., Ma H.S., Wang S.H., Fu Y.P., Xin Y., Liu W.Z., Wang F., Tong J.X., Wang S.Z., Chen H.Z.
BMC Plant Biology 2011 11 -
Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed
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Tian Y., Zhang H., Pan X., Chen X., Zhang Z., Lu X., Huang R.
Transgenic Res. 2011 20(4) 857-66
Overexpression of ethylene response factor TERF2 confers cold tolerance in rice seedlings.
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Seong ES,Guo J,Kim YH,Cho JH,Lim CK,Hyun Hur J,Wang MH
Biochem. Biophys. Res. Commun. 2007 363 126-32
Regulations of marker genes involved in biotic and abiotic stress by overexpression of the AtNDPK2 gene in rice.
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Sakamoto,A., Okumura,T., Kaminaka,H., Sumi,K. and Tanaka,K.
FEBS Lett. 1995 358(1) 62-66
Structure and differential response to abscisic acid of two promoters for the cytosolic copper/zinc-superoxide dismutase genes, SodCc1 and SodCc2, in rice protoplasts.
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Fitch,W.M. and Ayala,F.J.
Proc. Natl. Acad. Sci. U.S.A. 1994 91(15) 6802-6807
The superoxide dismutase molecular clock revisited.
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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Sakamoto,A., Ohsuga,H. and Tanaka,K.
Plant Mol. Biol. 1992 19(2) 323-327
Nucleotide sequences of two cDNA clones encoding different Cu/Zn-superoxide dismutases expressed in developing rice seed (Oryza sativa L.).
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Sakamoto,A., Okumura,T., Ohsuga,H. and Tanaka,K.
FEBS Lett. 1992 301(2) 185-189
Genomic structure of the gene for copper/zinc-superoxide dismutase in rice.
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TextPresso Search
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Search textpresso for SODCC2
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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response to brassinosteroid stimulus( GO:0009741 )
response to osmotic stress( GO:0006970 )
response to arsenic( GO:0046685 )
response to cold( GO:0009409 )
zinc ion binding( GO:0008270 )
removal of superoxide radicals( GO:0019430 )
response to iron ion( GO:0010039 )
response to ozone( GO:0010193 )
defense response to bacterium( GO:0042742 )
response to copper ion( GO:0046688 )
copper ion binding( GO:0005507 )
cytoplasm( GO:0005737 )
response to salt stress( GO:0009651 )
superoxide dismutase activity( GO:0004784 )
seed germination( GO:0009845 )
programmed cell death( GO:0012501 )
response to oxidative stress( GO:0006979 )
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Trait Ontology
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oxidative stress( TO:0002657 )
plant height( TO:0000207 )
panicle length( TO:0000040 )
filled grain number( TO:0000447 )
salt tolerance( TO:0006001 )
hydrogen peroxide content( TO:0000605 )
cold tolerance( TO:0000303 )
osmotic response sensitivity( TO:0000095 )
brassinosteroid sensitivity( TO:0002677 )
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Plant Ontology
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0 seed germination stage( PO:0007057 )
aleurone layer( PO:0005360 )
leaf( PO:0025034 )
shoot system( PO:0009006 )
carpel( PO:0009030 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
seed maturation stage( PO:0007632 )
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関連系統
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形質画像
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更新日
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2023-12-21 13:56:19.039
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更新情報
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