Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | RTH1 |
| Gene Symbol Synonym | OsAPY, RTH1, OsAPY3, APY3 |
| CGSNL Gene Name | ROOT HAIRLESS 1 |
| Gene Name Synonym | apyrase, root hairless 1, ATP-diphosphohydrolase, Apyrase 3 |
| Protein Name | ATP-DIPHOSPHOHYDROLASE |
| Allele | rth1 |
| Chromosome No. | 7 |
| Explanation | Q6Z4P2. OsAPY3 in Chowdhury et al. 2023. |
| Trait Class |
Vegetative organ - Root
Tolerance and resistance - Stress tolerance Tolerance and resistance - Disease resistance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK066262
|
| MSU ID |
LOC_Os07g48430.1
LOC_Os07g48430.2 LOC_Os07g48430.3 LOC_Os07g48430.4 |
| RAP ID |
Os07g0682800 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Chowdhury A.T., Hasan M.N., Bhuiyan F.H., Islam M.Q., Nayon M.R.W., Rahaman M.M., Hoque H., Jewel N.A., Ashrafuzzaman M., Prodhan S.H.
PLoS ONE 2023 18(5) e0273592 Identification, characterization of Apyrase (APY) gene family in rice (Oryza sativa) and analysis of the expression pattern under various stress conditions.
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Zhiming Y,Bo K,Xiaowei H,Shaolei L,Youhuang B,Wona D,Ming C,Hyung-Taeg C,Ping W
Plant J. 2011 66(5) 725-34 Root hair-specific EXPANSINs modulate root hair elongation in rice.
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Yuo T., Toyota M., Ichii M., Taketa S.
Breeding Science 2009 59(1) 13-20 Molecular cloning of a root hairless gene rth1 in rice
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to cold( GO:0009409 )
nucleoside diphosphate catabolic process( GO:0009134 ) nucleoside-diphosphatase activity( GO:0017110 ) ATP binding( GO:0005524 ) membrane( GO:0016020 ) response to flooding( GO:0009413 ) response to salt stress( GO:0009651 ) response to desiccation( GO:0009269 ) response to heat( GO:0009408 ) response to water deprivation( GO:0009414 ) response to anoxia( GO:0034059 ) defense response to virus( GO:0051607 ) defense response to bacterium( GO:0042742 ) |
| Trait Ontology |
bacterial leaf streak disease resistance( TO:0000203 )
viral disease resistance( TO:0000148 ) oxygen sensitivity( TO:0000015 ) drought tolerance( TO:0000276 ) heat tolerance( TO:0000259 ) salt tolerance( TO:0006001 ) submergence tolerance( TO:0000524 ) cold tolerance( TO:0000303 ) |
| Plant Ontology |
inflorescence( PO:0009049 )
seed( PO:0009010 ) carpel( PO:0009030 ) plant embryo( PO:0009009 ) endosperm( PO:0009089 ) plant callus( PO:0005052 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Aug 30, 2023 | |
