Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol RTH1
Gene Symbol Synonym OsAPY, RTH1, OsAPY3, APY3
CGSNL Gene Name ROOT HAIRLESS 1
Gene Name Synonym apyrase, root hairless 1, ATP-diphosphohydrolase, Apyrase 3
Protein Name ATP-DIPHOSPHOHYDROLASE
Allele rth1
Chromosome No. 7
Explanation Q6Z4P2. OsAPY3 in Chowdhury et al. 2023.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. AK066262
MSU ID LOC_Os07g48430.1
LOC_Os07g48430.2
LOC_Os07g48430.3
LOC_Os07g48430.4
RAP ID Os07g0682800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Chowdhury A.T., Hasan M.N., Bhuiyan F.H., Islam M.Q., Nayon M.R.W., Rahaman M.M., Hoque H., Jewel N.A., Ashrafuzzaman M., Prodhan S.H.
PLoS ONE 2023  18(5)  e0273592
Identification, characterization of Apyrase (APY) gene family in rice (Oryza sativa) and analysis of the expression pattern under various stress conditions.
Zhiming Y,Bo K,Xiaowei H,Shaolei L,Youhuang B,Wona D,Ming C,Hyung-Taeg C,Ping W
Plant J. 2011  66(5)  725-34
Root hair-specific EXPANSINs modulate root hair elongation in rice.
Yuo T., Toyota M., Ichii M., Taketa S.
Breeding Science 2009  59(1)  13-20
Molecular cloning of a root hairless gene rth1 in rice
TextPresso Search Search textpresso for RTH1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cold( GO:0009409 )
nucleoside diphosphate catabolic process( GO:0009134 )
nucleoside-diphosphatase activity( GO:0017110 )
ATP binding( GO:0005524 )
membrane( GO:0016020 )
response to flooding( GO:0009413 )
response to salt stress( GO:0009651 )
response to desiccation( GO:0009269 )
response to heat( GO:0009408 )
response to water deprivation( GO:0009414 )
response to anoxia( GO:0034059 )
defense response to virus( GO:0051607 )
defense response to bacterium( GO:0042742 )
Trait Ontology bacterial leaf streak disease resistance( TO:0000203 )
viral disease resistance( TO:0000148 )
oxygen sensitivity( TO:0000015 )
drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
submergence tolerance( TO:0000524 )
cold tolerance( TO:0000303 )
Plant Ontology inflorescence( PO:0009049 )
seed( PO:0009010 )
carpel( PO:0009030 )
plant embryo( PO:0009009 )
endosperm( PO:0009089 )
plant callus( PO:0005052 )
Related Strains
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Phenotype images
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Last updated
Aug 30, 2023


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