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Basic Information
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CGSNL Gene Symbol
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PORA
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Gene Symbol Synonym
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OsPorA, OsPORA
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CGSNL Gene Name
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PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A
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Gene Name Synonym
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NADPH: protochlorophyllide oxidoreductase A, Protochlorophyllide oxidoreductase A
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Protein Name
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PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A
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Allele
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Chromosome No.
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4
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Explanation
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Q7XKF3.
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Trait Class
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Tolerance and resistance - Stress tolerance
Coloration - Chlorophyll
Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK103943
AK065236
AK103940
AK104855
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MSU ID
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LOC_Os04g58200.1
LOC_Os04g58200.2
LOC_Os04g58200.3
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RAP ID
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Os04g0678700
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Yang Z., Bai T., E Z., Niu B., Chen C.
Elife 2024 13
OsNF-YB7 inactivates OsGLK1 to inhibit chlorophyll biosynthesis in rice embryo.
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Mo Y., Li G., Liu L., Zhang Y., Li J., Yang M., Chen S., Lin Q., Fu G., Zheng D., Ling Y.
Front Plant Sci 2023 14 1121852
<i>OsGRF4AA</i> compromises heat tolerance of developing pollen grains in rice.
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Lim C., Kim Y., Shim Y., Cho S.H., Yang T.J., Song Y.H., Kang K., Paek N.C.
Plant J. 2023
Rice OsGATA16 is a positive regulator for chlorophyll biosynthesis and chloroplast development.
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Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022 13 887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
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Lin X., Huang Y., Rao Y., Ouyang L., Zhou D., Zhu C., Fu J., Chen C., Yin J., Bian J., He H., Zou G., Xu J.
BMC Plant Biol. 2022 22(1) 612
A base substitution in OsphyC disturbs its Interaction with OsphyB and affects flowering time and chlorophyll synthesis in rice.
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Jin X., Baysal C., Drapal M., Sheng Y., Huang X., He W., Shi L., Capell T., Fraser P.D., Christou P., Zhu C.
Plants (Basel) 2021 10(7)
The Coordinated Upregulated Expression of Genes Involved in MEP, Chlorophyll, Carotenoid and Tocopherol Pathways, Mirrored the Corresponding Metabolite Contents in Rice Leaves during De-Etiolation.
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R A O Yuchun, J I A O Ran, W A N G Sheng, W U Xianmei, Y E Hanfei, P A N Chenyang, L I Sanfeng, Dedong X., Z H O U Weiyong, D A I Gaoxing, H U Juan, R E N Deyong, W A N G Yuexing
Rice (N Y) 2021 14(1) 34
SPL36 Encodes a Receptor-like Protein Kinase that Regulates Programmed Cell Death and Defense Responses in Rice.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Fang G., Yang S., Ruan B., Liu C., Zhang A., Jiang H., Ding S., Tian B., Zhang Y., Jahan N., Zhu L., Zhang G., Dong G., Zhang Q., Zeng D., Guo L., Gao Z., Qian Q.
Rice (N Y) 2020 13(1) 49
Isolation of TSCD11 Gene for Early Chloroplast Development under High Temperature in Rice.
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Zhu X., Mou C., Zhang F., Huang Y., Yang C., Ji J., Liu X., Cao P., Nguyen T., Lan J., Zhou C., Liu S., Jiang L., Wan J.
Rice (N Y) 2020 13(1) 45
WSL9 Encodes an HNH endonuclease domain-containing protein that Is Essential for Early Chloroplast Development in Rice.
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Hu W., Figueroa-Balderas R., Chi-Ham C., Lagarias J.C.
Plant Direct 2020 4(4) e00210
Regulation of monocot and dicot plant development with constitutively active alleles of phytochrome B.
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Liu X., Lan J., Huang Y., Cao P., Zhou C., Ren Y., He N., Liu S., Tian Y., Nguyen T., Jiang L., Wan J.
J. Exp. Bot. 2018 69(16) 3949-3961
WSL5, a pentatricopeptide repeat protein, is essential for chloroplast biogenesis in rice under cold stress.
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Liu Z., Wang Z., Gu H., You J., Hu M., Zhang Y., Zhu Z., Wang Y., Liu S., Chen L., Liu X., Tian Y., Zhou S., Jiang L., Liu L., Wan J.
Front Plant Sci 2018 9 782
Identification and Phenotypic Characterization of <i>ZEBRA LEAF16</i> Encoding a beta-hydroxyacyl-ACP dehydratase in Rice.
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Wei X., Song X., Wei L., Tang S., Sun J., Hu P., Cao X.
J Integr Plant Biol 2017 59(3) 158-163
An epiallele of rice AK1 affects photosynthetic capacity.
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Leng Y., Yang Y., Ren D., Huang L., Dai L., Wang Y., Chen L., Tu Z., Gao Y., Li X., Zhu L., Hu J., Zhang G., Gao Z., Guo L., Kong Z., Lin Y., Qian Q., Zeng D.
Plant Physiol. 2017
A rice pectate lyase-LIKE gene is required for plant growth and leaf senescence.
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Ge C., Wang L., Ye W., Wu L., Cui Y., Chen P., Pan J., Zhang D., Hu J., Zeng D., Dong G., Qian Q., Guo L., Xue D.
Sci Rep 2017 7(1) 3298
Single-point Mutation of an Histidine-aspartic Domain-containing Gene involving in Chloroplast Ribosome Biogenesis Leads to White Fine Stripe Leaf in Rice.
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Kwon C.T., Kim S.H., Song G., Kim D., Paek N.C.
Rice (N Y) 2017 10(1) 1
Two NADPH: Protochlorophyllide Oxidoreductase (POR) Isoforms Play Distinct Roles in Environmental Adaptation in Rice.
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Lu G., Casaretto J.A., Ying S., Mahmood K., Liu F., Bi Y.M., Rothstein S.J.
Plant Mol. Biol. 2017
Overexpression of OsGATA12 regulates chlorophyll content, delays plant senescence and improves rice yield under high density planting.
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Liu H., Li Q., Yang F., Zhu F., Sun Y., Tao Y., Lo C.
Plant Cell Physiol. 2016
Differential Regulation of protochlorophyllide oxidoreductase Abundances by VIRESCENT 5A (OsV5A) and VIRESCENT 5B (OsV5B) in Rice Seedlings.
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Inagaki N., Kinoshita K., Kagawa T., Tanaka A., Ueno O., Shimada H., Takano M.
PLoS ONE 2015 10(8) e0135408
Phytochrome B Mediates the Regulation of Chlorophyll Biosynthesis through Transcriptional Regulation of ChlH and GUN4 in Rice Seedlings.
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Yang Y., Xu J., Huang L., Leng Y., Dai L., Rao Y., Chen L., Wang Y., Tu Z., Hu J., Ren D., Zhang G., Zhu L., Guo L., Qian Q., Zeng D.
J. Exp. Bot. 2015
PGL, encoding chlorophyllide a oxygenase 1, impacts leaf senescence and indirectly affects grain yield and quality in rice.
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Sakuraba Y., Rahman M.L., Cho S.H., Kim Y.S., Koh H.J., Yoo S.C., Paek N.C.
Plant J. 2013 74(1) 122-33
The rice faded green leaf locus encodes protochlorophyllide oxidoreductase B and is essential for chlorophyll synthesis under high light conditions.
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Yang Q. , He H. , Li H. , Tian H. , Zhang J. , Zhai L. , Chen J. , Wu H. , Yi G. , He Z.H. , Peng X.
PLoS One 2011 6(5) e20015
NOA1 Functions in a Temperature-Dependent Manner to Regulate Chlorophyll Biosynthesis and Rubisco Formation in Rice.
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Ye J., Yang Y.L., Wei X.H., Niu X.J., Wang S., Xu Q., Yuan X.P., Yu H.Y., Wang Y.P., Feng Y., Wang S.
J Zhejiang Univ Sci B 19(4) 263-273
PGL3 is required for chlorophyll synthesis and impacts leaf senescence in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to carbohydrate stimulus( GO:0009743 )
response to alkalinity( GO:0010446 )
response to salt stress( GO:0009651 )
response to heat( GO:0009408 )
leaf development( GO:0048366 )
protochlorophyllide reductase activity( GO:0016630 )
chlorophyll biosynthetic process( GO:0015995 )
photosynthesis( GO:0015979 )
nucleotide binding( GO:0000166 )
response to light stimulus( GO:0009416 )
chloroplast organization( GO:0009658 )
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Trait Ontology
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light sensitivity( TO:0000075 )
chloroplast development trait( TO:0002715 )
leaf development trait( TO:0000655 )
chlorophyll ratio( TO:0000298 )
carotenoid content( TO:0000496 )
chlorophyll content( TO:0000495 )
heat tolerance( TO:0000259 )
salt tolerance( TO:0006001 )
alkali sensitivity( TO:0000481 )
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Plant Ontology
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leaf development stage( PO:0001050 )
anther( PO:0009066 )
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Related Strains
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Phenotype images
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Last updated
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Sep 27, 2025
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Update info.