Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SIZ2 |
| Gene Symbol Synonym | OsSIZ2 |
| CGSNL Gene Name | _ |
| Gene Name Synonym | SAP and MIZ 2, SIZ/PIAS-type SUMO E3 ligase 2 |
| Protein Name | _ |
| Allele | Ossiz2, ossiz2 |
| Chromosome No. | 3 |
| Explanation | SUMO E3 ligase, homolog of Arbidopsis SIZ. Q6ASW7. GO:2000070:regulation of response to water deprivation. GO:1901698: response to nitrogen compound. |
| Trait Class |
Seed - Morphological traits
Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity Reproductive organ - Spikelet, flower, glume, awn |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK065127
|
| MSU ID |
LOC_Os03g50980.1
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| RAP ID |
Os03g0719100 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Pei W., Jain A., Ai H., Liu X., Feng B., Wang X., Sun Y., Xu G., Sun S.
J. Plant Physiol. 2019 232 51-60 OsSIZ2 regulates nitrogen homeostasis and some of the reproductive traits in rice.
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Rosa M.T.G., Almeida D.M., Pires I.S., da Rosa Farias D., Martins A.G., da Maia LC., de Oliveira AC., Saibo N.J.M., Oliveira M.M., Abreu I.A.
BMC Plant Biol. 2018 18(1) 349 Insights into the transcriptional and post-transcriptional regulation of the rice SUMOylation machinery and into the role of two rice SUMO proteases.
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Wang H., Makeen K., Yan Y., Cao Y., Sun S., Xu G.
Plant Molecular Biology Reporter 2011 29 411-417 OsSIZ1 Regulates the Vegetative Growth and Reproductive Development in Rice
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Hyeong Cheol Park, Kim H., Sung Cheol Koo, Hee Jin Park, Mi Sun Cheong, Hong H., Baek D., Woo Sik Chung, Doh Hoon Kim, Ray A Bressan, Sang Yeol Lee, Hans J Bohnert, Dae-Jin Yun
Plant Cell Environ. 2010 33(11) 1923-34 Functional characterization of the SIZ/PIAS-type SUMO E3 ligases, OsSIZ1 and OsSIZ2 in rice.
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Chaikam V., Dale T Karlson
BMB Rep 2010 43(2) 103-9 Response and transcriptional regulation of rice SUMOylation system during development and stress conditions.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
zinc ion binding( GO:0008270 )
nucleic acid binding( GO:0003676 ) nucleus( GO:0005634 ) cell division( GO:0051301 ) cell growth( GO:0016049 ) negative regulation of flower development( GO:0009910 ) protein sumoylation( GO:0016925 ) regulation of abscisic acid mediated signaling( GO:0009787 ) regulation of growth( GO:0040008 ) regulation of salicylic acid metabolic process( GO:0010337 ) response to freezing( GO:0050826 ) response to cold( GO:0009409 ) response to salt stress( GO:0009651 ) SUMO ligase activity( GO:0019789 ) anther dehiscence( GO:0009901 ) anther development( GO:0048653 ) seed development( GO:0048316 ) |
| Trait Ontology |
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 ) seed length( TO:0000146 ) pollen fertility( TO:0000421 ) seed set percent( TO:0000455 ) seed development trait( TO:0000653 ) |
| Plant Ontology |
anther development stage( PO:0001004 )
seed development stage( PO:0001170 ) leaf( PO:0025034 ) |
| Related Strains | |
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| Phenotype images | |
| - | |
| Last updated | |
| Aug 10, 2019 | |
