Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PGD1
Gene Symbol Synonym Pgd1, 6Pgd1
CGSNL Gene Name PHOSPHOGLUCONATE DEHYDROGENASE
Gene Name Synonym Phosphogluconate dehydrogenase1, Phosphogluconate dehydrogenase 1, Phosphogluconate dehydrogenase-1
Protein Name PHOSPHOGLUCONATE DEHYDROGENASE
Allele Pgd1-1, Pgd1-2, Pgd1-3
Chromosome No. 11
Explanation Dimer. P(PAGE-TC,ST-C), C(ST-C). Differential allele frequencies between Indica and Japonica types.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
Link to INSD Accession List
Map
Locate(cM) 56.0
Link map Classical linkage map
References
Harata, Y., Y. Tuchimine and R. Ishikawa
RGN 1996  13  44-46.
Genetic characterization of Japanese upland rice and gene block on chromosome 11 Chromosomal polymorphic region (CPR).
Causse, M.A., T.M. Fulton, Y.G. Cho, S.N. Ahn, J. Chunwongse, K. Wu, J. Xiao, Z. Yu, P.C. Ronald, S.E. Harrington, G. Second, S.R. McCouch and S.D. Tanksley
Genetics 1994  138  1251-1274.
Saturated molecular map of the rice genome based on an interspecific backcross population.
Tanksley, S.D., T.M. Fulton and S.R. McCouch
Genetic Maps, Locus Maps of Complex Genomes, Plants. S.J. O'Brien ed. Cold Spring Harbour Lab. Press. 1993  Book 6  61-79.
Linkage map of rice (Oryza sativa) (2N=24).
Ishikawa, R., H. Morishima, T. Kinoshita, T. Harada, M. Niizeki and K. Saito
Japan. J. Breed. 1991  41(2)  265-272.
Linkage analysis of nine isozyme genes on the conventional linkage map in rice.
Ishikawa, R., H. Morishima and T. Kinoshita
Rice Genetics. II. IRRI, Manila, Philippines. 1991    127-136.
Linkage analysis and application of isozyme genes in rice.
Pham, J.L., J.C. Glaszmann, R. Sano, P. Barbier, A. Ghesquiere and G. Second
Genome 1990  33(3)  348-359.
Isozyme markers in rice genetic analysis and linkage relationships.
Ishikawa, R., H. Morishima, K. Mori and T. Kinoshita
J. Fac. Agr. Hokkaido Univ. 1989  64(1)  85-98.
Choromosomal analysis of isozyme loci and the allelic expression at cellular level in rice.- Genetical studies on rice plant, XCVII -.
Wu, K.S., J.C. Glaszmann and G.S. Khush
Biochem. Genet. 1988  26  303-320.
Chromosomal locations of ten isozyme in rice (Oryza sativa L.) through trisomic analysis.
Ishikawa, R., T. Kinoshita and H. Morishima
RGN 1988  5  81-82.
Linkage analysis of the Pgd-1 locus.
Ishikawa, R., T. Kinoshita and H. Morishima
RGN 1986  3  54-55.
A preliminary report on trisomic analysis of genes for isozymes
TextPresso Search Search textpresso for PGD1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0060600
Ontologies
Gene Ontology phosphogluconate dehydrogenase (decarboxylating) activity( GO:0004616 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
May 1, 2011


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