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Basic Information
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CGSNL Gene Symbol
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SODB
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Gene Symbol Synonym
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SodB, Fe-SOD, Fe- SOD, OsFe-SOD, Fe+-SOD, OsFe+-SOD, OsFe-SODa, OsFe-SODb, OsFeSODb, FeSODb, OsFSD1.2, FSD1.2, FeSOD2, OsFSD2, FSD2, OsFSD1, FSD1, ALM1, OsALM1, OsPAP4, PAP4, OsPAP4/OsFSD3, OsFSD3, FSD3
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CGSNL Gene Name
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SUPEROXIDE DISMUTASE B
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Gene Name Synonym
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Superoxide dismutase B, Fe-dependent superoxide dismutase, iron superoxide dismutase, iron-superoxide dismutase, Fe-dependent SOD 1.2, Fe-superoxide dismutase 2, PEP-associated protein 4, plastid-encoded plastid polymerase-associated protein 4
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Protein Name
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SUPEROXIDE DISMUTASE B
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Allele
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Chromosome No.
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6
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Explanation
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AY770495. AY770496 (promoter sequence), AY871310 (alternative spliced). OsFSD2 in Ge et al. 2020. OsFSD1 in Navarro et al. 2021. GO:0072593: reactive oxygen species metabolic process. GO:0120126: response to copper ion starvation.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK062073
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MSU ID
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LOC_Os06g05110.1
LOC_Os06g05110.3
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RAP ID
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Os06g0143000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
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Build5
)
RAP-DB
(
IRGSP 1.0
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Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Feng Z., Xu Y., Xie Z., Yang Y., Lu G., Jin Y., Wang M., Liu M., Yang H., Li W., Liang Z.
Plants (Basel) 2024 13(12)
Overexpression of Abscisic Acid Biosynthesis Gene <i>OsNCED3</i> Enhances Survival Rate and Tolerance to Alkaline Stress in Rice Seedlings.
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Zu X., Luo L., Wang Z., Gong J., Yang C., Wang Y., Xu C., Qiao X., Deng X., Song X., Chen C., Tan B.C., Cao X.
Nat Commun 2023 14(1) 6789
A mitochondrial pentatricopeptide repeat protein enhances cold tolerance by modulating mitochondrial superoxide in rice.
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Mei W., Chen W., Wang Y., Liu Z., Dong Y., Zhang G., Deng H., Liu X., Lu X., Wang F., Chen G., Tang W., Xiao Y.
Int J Mol Sci 2023 24(7)
Exogenous Kinetin Modulates ROS Homeostasis to Affect heat tolerance in Rice Seedlings.
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Lu X., Min W., Shi Y., Tian L., Li P., Ma T., Zhang Y., Luo C.
Front Plant Sci 2022 13 849553
Exogenous Melatonin Alleviates Alkaline Stress by Removing Reactive Oxygen Species and Promoting Antioxidant Defence in Rice Seedlings.
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Zhang C., Li N., Hu Z., Liu H., Hu Y., Tan Y., Sun Q., Liu X., Xiao L., Wang W., Wang R.
Int J Mol Sci 2022 23(22)
Mutation of <i>leaf senescence 1</i> Encoding a C2H2 Zinc Finger Protein Induces ROS Accumulation and Accelerates leaf senescence in Rice.
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Gu S., Zhuang J., Zhang Z., Chen W., Xu H., Zhao M., Ma D.
Front Plant Sci 2022 13 1110724
Multi-omics approach reveals the contribution of <i>OsSEH1</i> to rice cold tolerance.
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Luo C., Min W., Akhtar M., Lu X., Bai X., Zhang Y., Tian L., Li P.
Int J Mol Sci 2022 23(20)
Melatonin Enhances Drought Tolerance in Rice Seedlings by Modulating Antioxidant Systems, Osmoregulation, and Corresponding Gene Expression.
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Hu B., Zhou Y., Zhou Z., Sun B., Zhou F., Yin C., Ma W., Chen H., Lin Y.
Plant Biotechnol. J. 2021
Repressed OsMESL expression triggers reactive oxygen species-mediated broad-spectrum disease resistance in rice.
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Liu Q., Dong G.R., Ma Y.Q., Zhao S.M., Liu X., Li X.K., Li Y.J., Hou B.K.
Front Plant Sci 2021 12 790195
Rice Glycosyltransferase Gene <i>UGT85E1</i> Is Involved in Drought Stress Tolerance Through Enhancing Abscisic Acid Response.
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He Y., Zhang X., Shi Y., Xu X., Li L., Wu J.L.
Rice (N Y) 2021 14(1) 53
PREMATURE SENESCENCE LEAF 50 Promotes Heat Stress Tolerance in Rice (Oryza sativa L.).
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Navarro B.B., Del Frari BK., Dias PVDC., Lemainski L.E., Mario R.B., Ponte L.R., Goergen A., Tarouco C.P., Neves V.M., Dressler V.L., Fett J.P., Brunetto G., Sperotto R.A., Nicoloso F.T., Ricachenevsky F.K.
Plant Physiol. Biochem. 2021 158 113-124
The copper economy response is partially conserved in rice (Oryza sativa L.).
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Ge Q., Zhang Y., Xu Y., Bai M., Luo W., Wang B., Niu Y., Zhao Y., Li S., Weng Y., Wang Z., Qian Q., Chong K.
New Phytol. 2020 225(6) 2453-2467
cyclophilin OsCYP20-2 with a novel variant integrates defense and cell elongation for chilling response in rice.
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Xu Y., Wang R., Wang Y., Zhang L., Yao S.
Plant Cell Environ. 2020 43(4) 992-1007
A point mutation in ltt1 enhances cold tolerance at the booting stage in rice.
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Fang G., Yang S., Ruan B., Liu C., Zhang A., Jiang H., Ding S., Tian B., Zhang Y., Jahan N., Zhu L., Zhang G., Dong G., Zhang Q., Zeng D., Guo L., Gao Z., Qian Q.
Rice (N Y) 2020 13(1) 49
Isolation of TSCD11 Gene for Early Chloroplast Development under High Temperature in Rice.
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Zhang Q., Shen L., Wang Z., Hu G., Ren D., Hu J., Zhu L., Gao Z., Zhang G., Guo L., Zeng D., Qian Q.
Int J Mol Sci 2019 20(18)
OsCAF1, a CRM Domain Containing Protein, Influences Chloroplast Development.
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Atul Prakash Sathe, Su X., Chen Z., Chen T., Wei X., Tang S., Xiao-Bo Zhang, Jian-Li Wu
Rice (N Y) 2019 12(1) 68
Identification and characterization of a spotted-leaf mutant spl40 with enhanced bacterial blight resistance in rice.
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Ning X., Sun Y., Wang C., Zhang W., Sun M., Hu H., Liu J., Yang L.
Front Plant Sci 2018 9 111
A Rice CPYC-type Glutaredoxin <i>OsGRX20</i> in Protection against Bacterial Blight, Methyl Viologen and Salt Stresses.
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Xiong H., Yu J., Miao J., Li J., Zhang H., Wang X., Liu P., Zhao Y., Jiang C., Yin Z., Li Y., Guo Y., Fu B., Wang W., Li Z., Ali J., Li Z.
Plant Physiol. 2018 178(1) 451-467
Natural Variation in <i>OsLG3</i> Increases drought tolerance in Rice by Inducing ROS Scavenging.
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Wang S., Lei C., Wang J., Ma J., Tang S., Wang C., Zhao K., Tian P., Zhang H., Qi C., Cheng Z., Zhang X., Guo X., Liu L., Wu C., Wan J.
J. Exp. Bot. 2017 68(5) 899-913
SPL33, encoding an eEF1A-like protein, negatively regulates cell death and defense responses in rice.
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Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017 68(17) 4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
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Andrés-Bordería A., Andrés F., Garcia-Molina A., Perea-García A., Domingo C., Puig S., Peñarrubia L.
Plant Mol. Biol. 2017
Copper and ectopic expression of the Arabidopsis transport protein COPT1 alter iron homeostasis in rice (Oryza sativa L.).
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Leng Y., Yang Y., Ren D., Huang L., Dai L., Wang Y., Chen L., Tu Z., Gao Y., Li X., Zhu L., Hu J., Zhang G., Gao Z., Guo L., Kong Z., Lin Y., Qian Q., Zeng D.
Plant Physiol. 2017
A rice pectate lyase-LIKE gene is required for plant growth and leaf senescence.
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Wang L., Wang C., Wang Y., Niu M., Ren Y., Zhou K., Zhang H., Lin Q., Wu F., Cheng Z., Wang J., Zhang X., Guo X., Jiang L., Lei C., Wang J., Zhu S., Zhao Z., Wan J.
Plant Mol. Biol. 2016
WSL3, a component of the plastid-encoded plastid RNA polymerase, is essential for early chloroplast development in rice.
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Ruan S.L., Ma H.S., Wang S.H., Fu Y.P., Xin Y., Liu W.Z., Wang F., Tong J.X., Wang S.Z., Chen H.Z.
BMC Plant Biology 2011 11 -
Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed
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Wang,F., Wang,H., Liu,B. and Wang,J.
Plant Cell Rep. 2006 24(12) 734-742
Cloning and characterization of a novel splicing isoform of the iron-superoxide dismutase gene in rice (Oryza sativa L.).
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Kaminaka,H., Morita,S., Tokumoto,M., Yokoyama,H., Masumura,T. and Tanaka,K.
Biosci. Biotechnol. Biochem. 1999 63(2) 302-308
Molecular cloning and characterization of a cDNA for an iron-superoxide dismutase in rice (Oryza sativa L.).
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DB Reference
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Gramene ID
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Ontologies
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Gene Ontology
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response to oxidative stress( GO:0006979 )
response to cytokinin stimulus( GO:0009735 )
response to hormone stimulus( GO:0009725 )
response to heat( GO:0009408 )
metal ion binding( GO:0046872 )
superoxide dismutase activity( GO:0004784 )
superoxide metabolic process( GO:0006801 )
response to copper ion( GO:0046688 )
response to water deprivation( GO:0009414 )
chloroplast( GO:0009507 )
response to cold( GO:0009409 )
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Trait Ontology
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copper sensitivity( TO:0000021 )
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
hydrogen peroxide content( TO:0000605 )
heat tolerance( TO:0000259 )
plant growth hormone sensitivity( TO:0000401 )
cytokinin sensitivity( TO:0000167 )
oxidative stress( TO:0002657 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Mar 4, 2025
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Update info.