Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SODA1
Gene Symbol Synonym SodA1, Mn-SOD, Mn- SOD, OsMSD, MnSOD, MnSOD1
CGSNL Gene Name SUPEROXIDE DISMUTASE A1
Gene Name Synonym Superoxide dismutase A1, mitochondrial Mn-SOD, Mitochondrial Manganese Superoxide Dismutase, Manganese Superoxide Dismutase, Manganese-Superoxide Dismutase
Protein Name SUPEROXIDE DISMUTASE A1
Allele
Chromosome No. 5
Explanation LOC_Os05g25850. Q43008. L19436. L34038. AB026725. D29734.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK070528
MSU ID LOC_Os05g25850.1
LOC_Os05g25850.2
RAP ID Os05g0323900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Huang B., Zhang J.M., Chen X.L., Xin X., Yin G.K., He J.J., Lu X.X., Zhou Y.C.
Plant Cell Rep. 2018   
Oxidative damage and antioxidative indicators in 48 h germinated rice embryos during the vitrification-cryopreservation procedure.
Leng Y., Yang Y., Ren D., Huang L., Dai L., Wang Y., Chen L., Tu Z., Gao Y., Li X., Zhu L., Hu J., Zhang G., Gao Z., Guo L., Kong Z., Lin Y., Qian Q., Zeng D.
Plant Physiol. 2017   
A rice pectate lyase-LIKE gene is required for plant growth and leaf senescence.
Jiang G., Yin D., Zhao J., Chen H., Guo L., Zhu L., Zhai W.
Sci Rep 2016  6  26104
The rice thylakoid membrane-bound ascorbate peroxidase OsAPX8 functions in tolerance to bacterial blight.
Li C.R., Liang D.D., Li J., Duan Y.B., Li H., Yang Y.C., Qin R.Y., Li L., Wei P.C., Yang J.B.
Plant Cell Environ. 2013  36(4)  775-88
Unravelling mitochondrial retrograde regulation in the abiotic stress induction of rice ALTERNATIVE OXIDASE 1 genes.
Liu G., Tian H., Huang Y.Q., Hu J., Ji Y.X., Li S.Q., Feng Y.Q., Guo L., Zhu Y.G.
J. Biol. Chem. 2012  287(47)  40051-60
Alterations of mitochondrial protein assembly and jasmonic acid biosynthesis pathway in Honglian (HL)-type cytoplasmic male sterility rice.
Xu S., Hu B., He Z., Ma F., Feng J., Shen W., Yang J.
Int J Mol Sci 2011  12(4)  2488-501
Enhancement of Salinity Tolerance during Rice Seed Germination by Presoaking with Hemoglobin.
Fukao T,Yeung E,Bailey-Serres J
Plant Cell 2011  23(1)  412-27
The Submergence Tolerance Regulator SUB1A Mediates Crosstalk between Submergence and Drought Tolerance in Rice.
Ruan S.L., Ma H.S., Wang S.H., Fu Y.P., Xin Y., Liu W.Z., Wang F., Tong J.X., Wang S.Z., Chen H.Z.
BMC Plant Biology 2011  11  -
Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed
Kaminaka,H., Yokoi,H., Nosaka,Y., Sakamoto,A., Morita,S., Masumura,T. and Tanaka,K.
Plant Physiol. 1999  121(3)  1054-1055
Cloning and characterization of manganese-superoxide dismutase gene from rice (accession No. AB026725)
Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997  14(1)  71-75
Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
Sakamoto,A., Nosaka,Y. and Tanaka,K.
Plant Physiol. 1993  103(4)  1477-1478
Cloning and sequencing analysis of a complementary DNA for manganese-superoxide dismutase from rice (Oryza sativa L.).
TextPresso Search Search textpresso for SODA1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology superoxide dismutase activity( GO:0004784 )
mitochondrial matrix( GO:0005759 )
superoxide metabolic process( GO:0006801 )
defense response to bacterium( GO:0042742 )
Trait Ontology cms-hl type( TO:0000350 )
bacterial blight disease resistance( TO:0000175 )
hydrogen peroxide content( TO:0000605 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 28, 2019


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