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Basic Information
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CGSNL Gene Symbol
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MIR399J
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Gene Symbol Synonym
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OsmiR399j, osa-miR399j, osa-MIR399j, Os-miR399j, miR399j
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CGSNL Gene Name
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MICRORNA399J
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Gene Name Synonym
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microRNA399j, osa-miRNA399j
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Protein Name
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_
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Allele
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Chromosome No.
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4
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Explanation
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miRBASE accession: MI0001062. miR399 was upregulated by phosphate starvation.(Jeong et al. 2011) TO:0020102: phosphate content. GO:0072732: cellular response to calcium ion starvation.LM379302
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Trait Class
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Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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-
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MSU ID
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-
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RAP ID
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-
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Links
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INSD Accession List
(Test version)
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Baek D., Hong S., Kim H.J., Moon S., Jung K.H., Yang W.T., Kim D.H.
Int J Mol Sci 2024 25(4)
OsMYB58 Negatively Regulates Plant Growth and Development by Regulating Phosphate Homeostasis.
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Liu J., Liao W., Nie B., Zhang J., Xu W.
Plant J. 2021
OsUEV1B, an Ubc enzyme variant protein, is required for phosphate homeostasis in rice.
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Ruan W., Guo M., Wu P., Yi K.
Plant Mol. Biol. 2016
Phosphate starvation induced OsPHR4 mediates Pi-signaling and homeostasis in rice.
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Hu B., Wang W., Deng K., Li H., Zhang Z., Zhang L., Chu C.
Front Plant Sci 2015 6 188
MicroRNA399 is involved in multiple nutrient starvation responses in rice.
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Wang S., Zhang S., Sun C., Xu Y., Chen Y., Yu C., Qian Q., Jiang D.A., Qi Y.
New Phytol. 2014 201(1) 91-103
Auxin response factor (OsARF12), a novel regulator for phosphate homeostasis in rice (Oryza sativa).
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Secco D., Jabnoune M., Walker H., Shou H., Wu P., Poirier Y., Whelan J.
Plant Cell 2013 25(11) 4285-304
Spatio-Temporal Transcript Profiling of Rice Roots and Shoots in Response to Phosphate Starvation and Recovery.
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Dai X., Wang Y., Yang A., Zhang W.H.
Plant Physiol. 2012 159(1) 169-83
OsMYB2P-1, a R2R3 MYB transcription factor, is involved in regulation of phosphate-starvation responses and root architecture in rice.
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Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011 23(12) 4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
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Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011 39 D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
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Hu B., Zhu C., Li F., Tang J., Wang Y., Lin A., Liu L., Che R., Chu C.
Plant physiology 2011 156 1101-1105
Leaf tip necrosis1 plays a pivotal role in the regulation of multiple phosphate starvation responses in rice
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Wang Z,Hu H,Huang H,Duan K,Wu Z,Wu P
J. Integr. Plant Biol. 2009 51(7) 663-74
Regulation of OsSPX1 and OsSPX3 on expression of OsSPX domain genes and Pi-starvation signaling in rice.
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Wang C,Ying S,Huang H,Li K,Wu P,Shou H
Plant J. 2009 57 895-904
Involvement of OsSPX1 in phosphate homeostasis in rice.
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Bari R, Datt Pant B, Stitt M, Scheible WR.
Plant Physiol. 2006 141(3) 988-99
PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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mRNA cleavage( GO:0006379 )
cellular response to iron ion starvation( GO:0010106 )
cellular response to phosphate starvation( GO:0016036 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
cellular response to potassium ion starvation( GO:0051365 )
response to starvation( GO:0042594 )
phosphate ion homeostasis( GO:0055062 )
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Trait Ontology
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phosphorus sensitivity( TO:0000102 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Jun 26, 2024
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Update info.