Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol XA3
Gene Symbol Synonym Xa-3, Xa3 (Xa4b, Xa6, Xa9, Xa w), Xa3, Xaw, Xa6, Xa9, Xa4-b, XA26, Xa26(t), Xa26(t)*, Xa26, RKb, MRKb, MRKB, TRKb, Xa3/Xa26
CGSNL Gene Name XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 3
Gene Name Synonym Xanthomonas oryzae pv. oryzae resistance 3, Xanthomonas campestris pv. oryzae resistance-3, Xanthomonas oryzae pv. oryzae resistance-3, Xanthomonas oryzae pv. oryzae resistance 26
Protein Name
Allele
Chromosome No. 11
Explanation Resistant to the all Japanese Isolate groups in adult only. [366]. This gene is located on chromosome 11 and tightly linked with Xa4. PO:0009011; plant structure ; PO:0000003; whole plant. AY364476 (replaced by DQ355952). DQ355952, DQ355953. DQ426645, DQ426646, DQ426647. OoRKb1 (O. officinalis), OmRKb1 (O. minuta). wild rice orthologs: OoRKb1 (Xa3/Xa26-2) in O. officinalis (HQ148674), OmRKb1 (Xa3/Xa26-3) in O. minuta (HQ148675). leucine-rich repeat (LRR) receptor kinase-like protein.
Trait Class Tolerance and resistance - Disease resistance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
-
Map
Locate(cM)
Link map Classical linkage map
References
Reinke R., Kim S.M., Kim B.K.
Mol. Genet. Genomics 2018  293(6)  1565-1575
Developing japonica rice introgression lines with multiple resistance genes for brown planthopper, bacterial blight, rice blast, and rice stripe virus using molecular breeding.
Liu Y., Cao Y., Zhang Q., Li X., Wang S.
Plant Physiol. 2018  178(2)  923-935
A Cytosolic Triosephosphate Isomerase Is a Key Component in Xa3/XA26-Mediated Resistance.
Wang M., Yu Y., Haberer G., Marri P.R., Fan C., Goicoechea J.L., Zuccolo A., Song X., Kudrna D., Ammiraju J.S., Cossu R.M., Maldonado C., Chen J., Lee S., Sisneros N., de Baynast K., Golser W., Wissotski M., Kim W., Sanchez P., Ndjiondjop M.N., Sanni K., Long M., Carney J., Panaud O., Wicker T., Machado C.A., Chen M., Mayer K.F., Rounsley S., Wing R.A.
Nat. Genet. 2014  46(9)  982-8
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.
Chen X., Zuo S., Schwessinger B., Chern M., Canlas P.E., Ruan D., Zhou X., Wang J., Daudi A., Petzold C.J., Heazlewood J.L., Ronald P.C.
Mol Plant 2014  7(5)  874-92
An XA21-Associated Kinase (OsSERK2) Regulates Immunity Mediated by the XA21 and XA3 Immune Receptors.
Hyun-Su Park, Mun-Sik Shin, Ki-Young Kim, Tae-Hwan Noh, So-Hyeon Baek, Jong-Hee Lee, Ki-Yong Ha, Man-Kee Baek, Woo-Jae Kim, Jong-Ho Park, Jae-Soo Yoo, Young-Chan Cho, Bo-Kyeong Kim
Kor. J. Breed. Sci. 2013  45(2)  119-129
Reaction of Single Resistance Genes and Their Pyramiding Effects in Indica and Japonica Rice Against Xanthomonas oryzae pv. oryzae in Korea
Li H.J., Li X.H., Xiao J.H., Wing R.A., Wang S.P.
Mol Plant 2012  5(1)  281-90
Ortholog Alleles at Xa3/Xa26 Locus Confer Conserved Race-Specific Resistance against Xanthomonas oryzae in Rice.
Sun X. , Wang G.L.
PLoS One 2011  6(3)  e16079
Genome-wide identification, characterization and phylogenetic analysis of the rice LRR-kinases.
Cao Y,Duan L,Li H,Sun X,Zhao Y,Xu C,Li X,Wang S
Theor. Appl. Genet. 2007  115  887-95
Functional analysis of Xa3/Xa26 family members in rice resistance to Xanthomonas oryzae pv. oryzae.
Sun,X., Cao,Y. and Wang,S.
Plant Physiol. 2006  140(3)  998-1008
Point Mutations with Positive Selection Were a Major Force during the Evolution of a Receptor-Kinase Resistance Gene Family of Rice
Nino-Liu, D.O., P.C. Ronald and A.J. Bogdanove
Mol. Plant Pathol. 2006  7(5)  303-324
Pathogen profile Xanthomonas oryzae pathovars: model pathogens of a model crop.
Xiang,Y., Cao,Y., Xu,C., Li,X. and Wang,S.
Theor. Appl. Genet. 2006  113(7)  1347-1355
Xa3, conferring resistance for rice bacterial blight and encoding a receptor kinase-like protein, is the same as Xa26.
Sun,X., Cao,Y., Yang,Z., Xu,C., Li,X., Wang,S. and Zhang,Q.
Plant J. 2004  37(4)  517-527
Xa26, a gene conferring resistance to Xanthomonas oryzae pv. oryzae in rice, encodes an LRR receptor kinase-like protein.
Muralidharan, K., D. Krishnaveni, G.S. Laha, C.S. Reddy, M. Srinivasprasad and R. Sridhar
RGN 2003  20  96-98
Appraisal of bacterial leaf blight resistance genes in India.
Yang, Z., X. Sun, S. Wang, Q. Zhang
Theor. Appl. Genet. 2003  106  1467-1472
Genetic and physical mapping of a new gene for bacterial blight resistance in rice.
Kaku, H. and T. Ogawa
RGN 2000  17  76-78.
The relationship between browning reaction and bacterial blight resistance gene Xa3 in rice.
Endo, N., T. Ogawa and G.S. Khush
Breeding Science 1997  47  27-32.
Isozyme classification of Myanmar rice cultivars resistant to bacterial blight.
Ogawa, T.
Rice Genetics III. IRRI, Manila, Philippines. 1996    456-459.
Monitoring race distribution and identification of genes for resistance to bacterial leaf blight.
Yoshimura, A., J.X. Lei, T. Matsumoto, H. Tsunematsu, S. Yoshimura, N. Iwata, M.R. Baraoidan, T.W. Mew and R.J. Nelson
Rice Genetics III. IRRI, Manila, Philippines. 1996    577-581.
Analysis and pyramiding of bacterial blight resistance genes in rice by using DNA markers.
Yoshimura, S., A. Yoshimura, N. Iwata, S.R. McCouch, M.L. Abenes, M.R. Baraoidan, T.W. Mew and R. Nelson
Molecular Breeding 1995  1  375-387.
Tagging and combining bacterial blight resistance genes in rice using RAPD and RFLP markers.
Yoshimura, S., N. Kurata, T. Sasaki and A. Yoshimura
Recent Advances in Breeding 1994  36  33-36.
Genetic analysis of bacterial blight resistance genes in rice by using molecular markers.
Yoshimura, S., A. Yoshimura, R.J. Nelson, S.R. McCouch, T.W. Mew and N. Iwata
Japan. J. Breed. 1993  43(Suppl. 1)  161
Mapping and combining of bacterial blight resistance genes in rice using molecular markers.
Yoshimura, S., R. Nelson, A. Yoshimura, T.W. Mew and N. Iwata
RGN 1992  9  136-138.
RFLP mapping of the bacterical blight resistance genes Xa-3 and Xa-4.
Yoshimura, S., A. Yoshimura, A. Saito, N. Kishimoto, M. Kawase, M. Yano, M. Nakagahra, T. Ogawa and N. Iwata
Jpn. J. Genet. 1992  67  29-37.
RFLP analysis of introgressed chromosomal segments in three near-isogenic lines of rice for bacterial blight resistance genes, Xa-1, Xa-3 and Xa-4.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
Japan. J. Breed. 1990  40(4)  435-447.
Genetics of resistance in rice cultivars, IR20 and Semora Mangga to Philippine and Japanese races of bacterial blight pathogen.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
Japan. J. Breed. 1990  40(3)  329-338.
Genetics of resistance in rice cultivar, Sateng to Philippine and Japanese races of bacterial blight pathogen.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
Japan. J. Breed. 1990  40(2)  183-192.
Genetics of resistance in rice cultivars, Zenith and Cempo Selak to Philippine and Japanese races of bacterial blight pathogen.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
Japan. J. Breed. 1987  37(Suppl. 1)  176-177.
Relationship among Xa-3, Xa-4 and Xa-4b resistant genes to rice bacterial leaf blight.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
RGN 1986  3  80-82.
Inheritance of resistance to bacterial blight in Sateng. -A reinvestigation.
Ogawa, T., T. Yamamoto, G.S. Khush and T.W. Mew
RGN 1986  3  79-80.
The relationship between genes Xa-3 and Xa-6 for resistance to rice bacterial blight.
Ogawa, T. and T. Yamamoto
Rice Genetics. IRRI, Manila, Philippines. 1986    471-479.
Inheritance of resistance to bacterial blight in rice.
Ogawa, T., R.E. Tabien, G.A. Busto, G.S. Khush and T.W. Mew
RGN 1986  3  83-84.
The relationship between Xa-3, Xa-4 and Xa-4b for resistances to rice bacterial blight.
Singh, R.J., G.S. Khush and T.W. Mew
Crop Sci. 1983  23(3)  558-560.
A new gene for resistance to bacterial blight in rice.
Sidhu,G.S. G.S.Khush
Phytopathology 1978  68(3)  461-463
Dominance reversal of a bacterial blight resistance gene in some rice cultivars.
Ogawa, T., T. Morinaka, K. Fujii and T. Kimura
Ann. Phytopath. Soc. Japan 1978  44(2)  137-141.
Inheritance of resistance of rice varieties Kogyoku and Java 14 to bacterial group V of Xanthomonas oryzae.
Petpisit, V., G.S. Khush and H.E. Kauffman
Crop Sci. 1977  17(4)  551-554.
Inheritance of resistance to bacterial blight in rice.
Ezuka, A., O. Horino, K. Toriyama, H. Shinoda and T. Morinaka
Bull. Tokai-Kinki Agr. Exp. Stn. 1975  28  124-130.
Inheritance of resistance of rice variety Wase Aikoku 3 to Xanthomonas oryzae.
TextPresso Search Search textpresso for XA3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID GR:0061013,GR:0061358
Ontologies
Gene Ontology defense response to bacterium( GO:0042742 )
protein serine/threonine kinase activity( GO:0004674 )
ATP binding( GO:0005524 )
integral to membrane( GO:0016021 )
Trait Ontology bacterial blight disease resistance( TO:0000175 )
Plant Ontology whole plant( PO:0000003 )
plant structure( PO:0009011 )
Related Strains
Stocks for Genes 1
Phenotype images
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Last updated
May 4, 2019


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