Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol YUCCA11
Gene Symbol Synonym OsYUCCA11, OsYUC11, YUC11
CGSNL Gene Name YUCCA-LIKE GENE 11
Gene Name Synonym
Protein Name
Allele osyuc11, osyuc11-1, osyuc11-2, osyuc11-3, osyuc11-4
Chromosome No. 12
Explanation an orthologue of AtYUCCA. TO:0020106: Indole-3-acetic acid content. PO:0030104: caryopsis fruit.
Trait Class Biochemical character
Seed - Morphological traits - Endosperm
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os12g08780.1
RAP ID Os12g0189500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Liu S., Wu J., Mawia A.M., Wei X., Cao R., Jiao G., Wu Y., Zhang J., Xie L., Sheng Z., Hu S., Li S., Lv Y., Lu F., Chen Y., Fiaz S., Tabassum J., Du Z., Gao F., Ren G., Shao G., Hu P., Tang S.
Plant Biotechnol. J. 2025  23(4)  1021-1038
A novel transcription factor OsMYB73 affects grain size and chalkiness by regulating endosperm storage substances' accumulation-mediated auxin biosynthesis signalling pathway in rice.
Navea I.P., Maung P.P., Yang S., Han J.H., Jing W., Shin N.H., Zhang W., Chin J.H.
Front Plant Sci 2023  14  1226297
A meta-QTL analysis highlights genomic hotspots associated with phosphorus use efficiency in rice (<i>Oryza sativa</i> L.).
Zhang D., Zhang M., Liang J.
Front Plant Sci 2021  12  585174
RGB1 Regulates Grain Development and Starch Accumulation Through Its Effect on <i>OsYUC11</i>-Mediated Auxin Biosynthesis in Rice Endosperm Cells.
Xu X., E Z., Zhang D., Yun Q., Zhou Y., Niu B., Chen C.
Plant Physiol. 2021  185(3)  934-950
OsYUC11-mediated auxin biosynthesis is essential for endosperm development of rice.
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019  12(1)  92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
Sarah Russell French, Yousef Abu-Zaitoon, Md Myn Uddin, Bennett K., Heather M Nonhebel
Plants (Basel) 2014  3(1)  95-112
Auxin and Cell Wall Invertase Related Signaling during Rice Grain Development.
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Abu-Zaitoon YM., Bennett K., Normanly J., Nonhebel H.M.
Physiol Plant 2012  146(4)  487-99
A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferase OsTAR1 and a grain-specific YUCCA.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to nutrient levels( GO:0031667 )
response to starvation( GO:0042594 )
cellular response to phosphate starvation( GO:0016036 )
seed development( GO:0048316 )
endosperm development( GO:0009960 )
seed maturation( GO:0010431 )
auxin biosynthetic process( GO:0009851 )
Trait Ontology auxin content( TO:0002672 )
seed maturation( TO:0002661 )
starch content( TO:0000696 )
grain size( TO:0000397 )
seed development trait( TO:0000653 )
seed composition based quality trait( TO:0000488 )
seed size( TO:0000391 )
chalky endosperm( TO:0000266 )
fat and essential oil composition related trait( TO:0000491 )
total fat content( TO:0000602 )
protein composition related trait( TO:0000490 )
endosperm storage protein content( TO:0002653 )
phosphorus sensitivity( TO:0000102 )
Plant Ontology endosperm( PO:0009089 )
seed maturation stage( PO:0007632 )
endosperm development stage( PO:0007633 )
plant embryo( PO:0009009 )
seed development stage( PO:0001170 )
aleurone layer( PO:0005360 )
central endosperm( PO:0006220 )
Related Strains
-
Phenotype images
-
Last updated
Jun 5, 2025

/rice/oryzabase