Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol YUCCA11
Gene Symbol Synonym OsYUCCA11, OsYUC11, YUC11
CGSNL Gene Name YUCCA-LIKE GENE 11
Gene Name Synonym
Protein Name
Allele osyuc11, osyuc11-1, osyuc11-2, osyuc11-3, osyuc11-4
Chromosome No. 12
Explanation an orthologue of AtYUCCA. TO:0020106: Indole-3-acetic acid content. PO:0030104: caryopsis fruit.
Trait Class Biochemical character
Seed - Morphological traits - Endosperm
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os12g08780.1
RAP ID Os12g0189500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Navea I.P., Maung P.P., Yang S., Han J.H., Jing W., Shin N.H., Zhang W., Chin J.H.
Front Plant Sci 2023  14  1226297
A meta-QTL analysis highlights genomic hotspots associated with phosphorus use efficiency in rice (<i>Oryza sativa</i> L.).
Zhang D., Zhang M., Liang J.
Front Plant Sci 2021  12  585174
RGB1 Regulates Grain Development and Starch Accumulation Through Its Effect on <i>OsYUC11</i>-Mediated Auxin Biosynthesis in Rice Endosperm Cells.
Xu X., E Z., Zhang D., Yun Q., Zhou Y., Niu B., Chen C.
Plant Physiol. 2021  185(3)  934-950
OsYUC11-mediated auxin biosynthesis is essential for endosperm development of rice.
Liu Q., Ting-Ting Chen, Dong-Wang Xiao, Shu-Man Zhao, Ji-Shan Lin, Wang T., Yan-Jie Li, Bing-Kai Hou
Rice (N Y) 2019  12(1)  92
OsIAGT1 Is a Glucosyltransferase Gene Involved in the Glucose Conjugation of Auxins in Rice.
Sarah Russell French, Yousef Abu-Zaitoon, Md Myn Uddin, Bennett K., Heather M Nonhebel
Plants (Basel) 2014  3(1)  95-112
Auxin and Cell Wall Invertase Related Signaling during Rice Grain Development.
Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014  172(5)  2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
Abu-Zaitoon YM., Bennett K., Normanly J., Nonhebel H.M.
Physiol Plant 2012  146(4)  487-99
A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferase OsTAR1 and a grain-specific YUCCA.
Fujino,K., Matsuda,Y., Ozawa,K., Nishimura,T., Koshiba,T., Fraaije,M.W. and Sekiguchi,H.
Mol. Genet. Genomics 2008  279(5)  499-507
NARROW LEAF 7 controls leaf shape mediated by auxin in rice
TextPresso Search Search textpresso for YUCCA11 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to nutrient levels( GO:0031667 )
response to starvation( GO:0042594 )
cellular response to phosphate starvation( GO:0016036 )
seed development( GO:0048316 )
endosperm development( GO:0009960 )
seed maturation( GO:0010431 )
auxin biosynthetic process( GO:0009851 )
Trait Ontology auxin content( TO:0002672 )
seed maturation( TO:0002661 )
starch content( TO:0000696 )
grain size( TO:0000397 )
seed development trait( TO:0000653 )
seed composition based quality trait( TO:0000488 )
seed size( TO:0000391 )
chalky endosperm( TO:0000266 )
fat and essential oil composition related trait( TO:0000491 )
total fat content( TO:0000602 )
protein composition related trait( TO:0000490 )
endosperm storage protein content( TO:0002653 )
phosphorus sensitivity( TO:0000102 )
Plant Ontology endosperm( PO:0009089 )
seed maturation stage( PO:0007632 )
endosperm development stage( PO:0007633 )
plant embryo( PO:0009009 )
seed development stage( PO:0001170 )
aleurone layer( PO:0005360 )
central endosperm( PO:0006220 )
Related Strains
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Phenotype images
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Last updated
Dec 1, 2023


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