Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol GA2OX6
Gene Symbol Synonym OsGA2ox6
CGSNL Gene Name GIBBERELLIN 2-OXIDASE 6
Gene Name Synonym GA 2-oxidase 6
Protein Name GIBBERELLIN 2-OXIDASE 6
Allele
Chromosome No. 4
Explanation CAE03751, AL662958
Trait Class Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK107142
MSU ID LOC_Os04g44150.1
RAP ID Os04g0522500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Guo H., Gao S., Li H., Yang J., Li J., Gu Y., Lou Q., Su R., Ye W., Zou A., Wang Y., Sun X., Zhang Z., Zhang H., Zeng Y., Yuan P., Peng Y., Li Z., Li J.
Nat Commun 2025  16(1)  1032
Natural variation of CTB5 confers cold adaptation in plateau japonica rice.
Lorenzo C.D.
Plant Cell 2024   
Small but mighty: OsKANADI1 and OsYABBY5 regulate plant stature by tuning GA metabolism in rice.
He Q., Wu H., Zeng L., Yin C., Wang L., Tan Y., Lv W., Liao Z., Zheng X., Zhang S., Han Q., Wang D., Zhang Y., Xiong G., Wang Q.
Plant Cell 2024   
OsKANADI1 and OsYABBY5 regulate rice plant height by targeting GIBERELLIN 2-OXIDASE6.
Tang H., Fan J., Wang R., Zhu J., Xiang X., Dong J., Zhou L., Wang L.
G3 (Bethesda) 2023  13(7) 
Changes in the expression pattern of OsWUS negatively regulate plant stature and panicle development in rice.
Guo F., Zhang P., Wu Y., Lian G., Yang Z., Liu W., Buerte B., Zhou C., Zhang W., Li D., Han N., Tong Z., Zhu M., Xu L., Chen M., Bian H.
Front Plant Sci 2022  13  887980
Rice LEAFY COTYLEDON1 Hinders Embryo Greening During the Seed Development.
Wang Y., Du F., Wang J., Li Y., Zhang Y., Zhao X., Zheng T., Li Z., Xu J., Wang W., Fu B.
Int J Mol Sci 2021  22(17) 
Molecular Dissection of the Gene <i>OsGA2ox8</i> Conferring Osmotic Stress Tolerance in Rice.
He Y., Zhu M., Li Z., Jiang S., He Z., Xu S., Chen X., Hu Z., Zhang Z.
Int J Mol Sci 2021  22(12) 
<i>IPA1</i> Negatively Regulates Early Rice Seedling Development by Interfering with Starch Metabolism via the GA and <i>WRKY</i> Pathways.
Hsieh K.T., Chen Y.T., Hu T.J., Lin S.M., Hsieh C.H., Liu S.H., Shiue S.Y., Lo S.F., Wang I.W., Tseng C.S., Chen L.J.
Rice (N Y) 2021  14(1)  70
Comparisons within the Rice GA 2-Oxidase Gene Family Revealed Three Dominant Paralogs and a Functional Attenuated Gene that Led to the Identification of Four Amino Acid Variants Associated with GA Deactivation Capability.
Xu P., Ali A., Han B., Wu X.
Front Plant Sci 2018  9  1528
Current Advances in Molecular Basis and Mechanisms Regulating Leaf Morphology in Rice.
Liu L., Xia W., Li H., Zeng H., Wei B., Han S., Yin C.
Front Plant Sci 2018  9  275
Salinity Inhibits Rice Seed Germination by Reducing alpha-amylase Activity via Decreased Bioactive Gibberellin Content.
Zhou W., Malabanan P.B., Abrigo E.
Euphytica 2014  201  97-107
OsHox4 regulates GA signaling by interacting with DELLA-like genes and GA oxidase genes in rice
Hirose F., Inagaki N., Takano M.
Plant Signal Behav 2013  8(3) 
Differences and similarities in the photoregulation of gibberellin metabolism between rice and dicots.
Hirose F., Inagaki N., Hanada A., Yamaguchi S., Kamiya Y., Miyao A., Hirochika H., Takano M.
Plant Cell Physiol. 2012  53(9)  1570-82
Cryptochrome and Phytochrome Cooperatively but Independently Reduce Active Gibberellin Content in Rice Seedlings under Light Irradiation.
Huang J., Tang D., Shen Y., Qin B., Hong L., You A., Li M., Wang X., Yu H., Gu M., Cheng Z.
J Genet Genomics 2010  37(1)  23-36
Activation of gibberellin 2-oxidase 6 decreases active gibberellin levels and creates a dominant semi-dwarf phenotype in rice (Oryza sativa L.).
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Lo SF, Yang SY, Chen KT, Hsing YI, Zeevaart JA, Chen LJ, Yu SM.
The Plant Cell 2008  20(10)  2603-18
A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice.
Yamaguchi S.
Annual Review of Plant Biology 2008  59  225-51
Gibberellin metabolism and its regulation.
Lee DJ, Zeevaart JA.
Plant physiology 2005  138(1)  243-54
Molecular cloning of GA 2-oxidase3 from spinach and its ectopic expression in Nicotiana sylvestris.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cold( GO:0009409 )
gibberellin catabolic process( GO:0045487 )
response to salt stress( GO:0009651 )
gibberellin metabolic process( GO:0009685 )
Trait Ontology plant height( TO:0000207 )
gibberellic acid content( TO:0002675 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
Plant Ontology anther( PO:0009066 )
Related Strains
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Phenotype images
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Last updated
Jun 17, 2025

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