遺伝子 - 詳細

詳細 - 遺伝子

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Basic Information
CGSNL 遺伝子シンボル DEP3
遺伝子シンボルシノニム dep3, OspPLAIIIdelta, pPLAIIIdelta
CGSNL 遺伝子名 DENSE AND ERECT PANICLE 3
遺伝子名シノニム dense and erect panicle 3, Patatin-related phospholipase A III delta
タンパク質名
対立遺伝子 dep3
染色体番号 6
解説 DEP3 gene was predicted to encode a patatin-like phospholipase A2 (PLA2) superfamily domain-containing protein. Control panicle length, grain number per panicle. TO:0000800: inflorescence density, TO:0000847: panicle anatomy and morphology trait. TO:0000975: grain width.
形質クラス 種子 - 形態学的な特色 - 粒形
QTLの特性 - 収穫と生産性
生殖器官 - 穂、枝梗
発現
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os06g46350.1
RAP ID Os06g0677000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
マップ
位置情報(cM)
リンケージマップ Classical linkage map
文献
Wang Y., Lv Y., Yu H., Hu P., Wen Y., Wang J., Tan Y., Wu H., Zhu L., Wu K., Chai B., Liu J., Zeng D., Zhang G., Zhu L., Gao Z., Dong G., Ren D., Shen L., Zhang Q., Li Q., Guo L., Xiong G., Qian Q., Hu J.
Plant Commun 2023    100673
GR5 acts in the G protein pathway to regulate grain size in rice.
Cui D., Zhou H., Ma X., Lin Z., Sun L., Han B., Li M., Sun J., Liu J., Jin G., Wang X., Cao G., Deng X.W., He H., Han L.
Plant Commun 2022  3(3)  100325
Genomic insights on the contribution of introgressions from Xian/Indica to the genetic improvement of Geng/Japonica rice cultivars.
Abbai R., Singh V.K., Nachimuthu V.V., Sinha P., Selvaraj R., Vipparla A.K., Singh A.K., Singh U.M., Varshney R.K., Kumar A.
Plant Biotechnol. J. 2019   
Haplotype analysis of key genes governing grain yield and quality traits across 3K RG panel reveals scope for the development of tailor-made rice with enhanced genetic gains.
Liu G., Zhang K., Ai J., Su Y., Deng X., Hong Y., Wang X.
J. Exp. Bot. 2015   
Patatin-related phospholipase A, pPLAIIIalpha, modulates the longitudinal growth of vegetative tissues and seeds in rice.
Liang W., Shang F., Lin Q., Lou C., Zhang J.
Gene 2014  537(1)  1-5
Tillering and panicle branching genes in rice.
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013  16(2)  213-20
Genes offering the potential for designing yield-related traits in rice.
Shahinnia F., Druka A., Franckowiak J., Morgante M., Waugh R., Stein N.
Theoretical and Applied Genetics 2012  124  373-384
High resolution mapping of dense spike-ar (dsp.ar) to the genetic centromere of barley chromosome 7H
Qiao Y,Piao R,Shi J,Lee SI,Jiang W,Kim BK,Lee J,Han L,Ma W,Koh HJ
Theor. Appl. Genet. 2011  122(7)  1439-49
Fine mapping and candidate gene analysis of dense and erect panicle 3, DEP3, which confers high grain yield in rice (Oryza sativa L.).
TextPresso Search Search textpresso for DEP3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
オントロジー
Gene Ontology lipid metabolic process( GO:0006629 )
hydrolase activity( GO:0016787 )
Trait Ontology grain yield( TO:0000396 )
grain number( TO:0002759 )
inflorescence branching( TO:0000050 )
grain size( TO:0000397 )
grain length( TO:0000734 )
Plant Ontology -
関連系統
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形質画像
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更新日
2024-01-12 10:17:41.355

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