Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SSG6
Gene Symbol Synonym OsACS6, ACS6
CGSNL Gene Name SUBSTANDARD STARCH GRAIN6
Gene Name Synonym substandard starch grain 6, ACC SYNTHASE 6
Protein Name ACC SYNTHASE 6
Allele ssg6
Chromosome No. 6
Explanation
Trait Class Biochemical character
Seed - Morphological traits - Endosperm
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Storage substances
Expression
Sequence/Locus
cDNA Accession No. AK065212
MSU ID LOC_Os06g03990.1
RAP ID Os06g0130400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yan H., Ren Y., Zhang B., Jin J., Du F., Shan Z., Fu Y., Zhu Y., Wang X., Zhu C., Cai Y., Zhang J., Wang F., Zhang X., Wang R., Wang Y., Xu H., Jiang L., Liu X., Zhu S., Lin Q., Lei C., Cheng Z., Wang Y., Zhang W., Wan J.
Plant Biotechnol. J. 2024   
SUBSTANDARD STARCH GRAIN7 regulates starch grain size and endosperm development in rice.
Chen H., Zhang Q., Cai H., Xu F.
Front Plant Sci 2017  8  1839
Ethylene Mediates Alkaline-Induced Rice Growth Inhibition by Negatively Regulating Plasma Membrane H+-ATPase Activity in Roots.
Matsushima R., Maekawa M., Kusano M., Tomita K., Kondo H., Nishimura H., Crofts N., Fujita N., Sakamoto W.
Plant Physiol. 2016  170(3)  1445-59
Amyloplast Membrane Protein SUBSTANDARD STARCH GRAIN6 Controls Starch Grain Size in Rice Endosperm.
Shen X., Liu H., Yuan B., Li X., Xu C., Wang S.
Plant Cell Environ. 2011  34(2)  179-91
OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesis.
Iwamoto M, Takano M.
Biotechnol. Lett. 2010  33(1)  173-178
Phytochrome-regulated EBL1 contributes to ACO1 upregulation in rice.
Iwai T, Miyasaka A, Seo S, Ohashi Y.
Plant Physiol. 2006  142(3)  1202-15
Contribution of ethylene biosynthesis for resistance to blast fungus infection in young rice plants.
DB Reference
Gramene ID -
Ontologies
Gene Ontology endosperm development( GO:0009960 )
regulation of starch biosynthetic process( GO:0010581 )
1-aminocyclopropane-1-carboxylate synthase activity( GO:0016847 )
ethylene biosynthetic process( GO:0009693 )
chloroplast organization( GO:0009658 )
amyloplast membrane( GO:0033097 )
Trait Ontology starch grain size( TO:0002655 )
chalky endosperm( TO:0000266 )
grain size( TO:0000397 )
grain width( TO:0000402 )
grain weight( TO:0000590 )
chloroplast development trait( TO:0002715 )
starch grain synthesis( TO:0002658 )
Plant Ontology endosperm( PO:0009089 )
root( PO:0009005 )
Related Strains
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Phenotype images
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Last updated
Jan 20, 2025

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