Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SG1 |
| Gene Symbol Synonym | OsSG1, Sg1 |
| CGSNL Gene Name | SHORT GRAIN 1 |
| Gene Name Synonym | SHORT GRAIN1, Short grain 1 |
| Protein Name | |
| Allele | Sg1, Sg1-D |
| Chromosome No. | 9 |
| Explanation | Rice overexpressor shows short grain phenotype. Knock-down line shows long grain phenotype. |
| Trait Class |
Vegetative organ - Leaf
Vegetative organ - Culm Reproductive organ - panicle Seed - Morphological traits - Grain shape Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK110733
|
| MSU ID |
LOC_Os09g28520.1
|
| RAP ID |
Os09g0459200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Pei W., Jain A., Ai H., Liu X., Feng B., Wang X., Sun Y., Xu G., Sun S.
J. Plant Physiol. 2019 232 51-60 OsSIZ2 regulates nitrogen homeostasis and some of the reproductive traits in rice.
|
|
|
Zhang C., Bai M.Y., Chong K.
Plant Cell Rep. 2014 33(5) 683-96 Brassinosteroid-mediated regulation of agronomic traits in rice.
|
|
|
Ikeda M., Miura K., Aya K., Kitano H., Matsuoka M.
Curr. Opin. Plant Biol. 2013 16(2) 213-20 Genes offering the potential for designing yield-related traits in rice.
|
|
|
Nakagawa H., Tanaka A., Tanabata T., Ohtake M., Fujioka S., Nakamura H., Ichikawa H., Mori M.
Plant Physiol. 2011 SHORT GRAIN 1 Decreases Organ Elongation and Brassinosteroid Response in Rice.
|
|
|
Mori-M, Tomita-C, Hasegawa-M, Hayashi-N, Sugimoto-K, Sekimoto-H, Hirochika-H, Kikuchi-S
Breeding Res. 2004 6(Suppl.2) 102 Isolation of a lesion mimic mutant and a short grain mutant by rice activation tagging and analyses of causative genes
|
|
| TextPresso Search | Search textpresso for SG1 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
brassinosteroid mediated signaling( GO:0009742 )
negative regulation of cell proliferation( GO:0008285 ) response to brassinosteroid stimulus( GO:0009741 ) inflorescence development( GO:0010229 ) seed development( GO:0048316 ) |
| Trait Ontology |
plant height( TO:0000207 )
grain size( TO:0000397 ) brassinosteroid sensitivity( TO:0002677 ) internode length( TO:0000145 ) leaf angle( TO:0000206 ) leaf color( TO:0000326 ) leaf width( TO:0000370 ) grain length( TO:0000734 ) panicle length( TO:0000040 ) seed length( TO:0000146 ) seed development trait( TO:0000653 ) inflorescence development trait( TO:0000621 ) |
| Plant Ontology |
seed development stage( PO:0001170 )
inflorescence development stage( PO:0001083 ) stem elongation stage( PO:0007089 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Aug 10, 2019 | |
