Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PAIR3
Gene Symbol Synonym
Gene Name Synonym
Allele pair3, pair3-1, pair3-2
Chromosome No. 10
Explanation FJ449711, FJ449712, B9G5N1, Homologous chromosome pairing and synapsis in meiosis. T-DNA insertion lines, pair3-1 and pair3-2, exhibit male and female sterility.
Trait Class Reproductive organ - Pollination, fertilization, fertility - Meiosis
cDNA Accession No. FJ449712
MSU ID LOC_Os10g26560.1
RAP ID Os10g0405500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Zhang F., Tang D., Shen Y., Xue Z., Shi W., Ren L., Du G., Li Y., Cheng Z.
Plant Cell 2017  29(10)  2597-2609
The F-box protein zygo1 Mediates Bouquet Formation to Promote Homologous Pairing, Synapsis, and Recombination in Rice Meiosis.
Tang D., Miao C., Li Y., Wang H., Liu X., Yu H., Cheng Z.
Front Plant Sci 2014  5  167
OsRAD51C is essential for double-strand break repair in rice meiosis.
Luo Q., Tang D., Wang M., Luo W., Zhang L., Qin B., Shen Y., Wang K., Li Y., Cheng Z.
Mol Plant 2013  6(3)  729-42
The Role of Osmsh5 in Crossover Formation during Rice Meiosis.
Miao C., Tang D., Zhang H., Wang M., Li Y., Tang S., Yu H., Gu M., Cheng Z.
Plant Cell 2013  25(8)  2998-3009
CENTRAL REGION COMPONENT1, a Novel Synaptonemal Complex Component, Is Essential for Meiotic Recombination Initiation in Rice.
Ji J., Tang D., Wang M., Li Y., Zhang L., Wang K., Li M., Cheng Z.
Chromosoma 2013  122(5)  363-76
MRE11 is required for homologous synapsis and DSB processing in rice meiosis.
Ji J., Tang D., Wang K., Wang M., Che L., Li M., Cheng Z.
Plant J. 2012  72(1)  18-30
The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis.
Wang,K., Wang,M., Tang,D., Shen,Y., Miao,C., Hu,Q., Lu,T. and Cheng,Z.
PLoS Genet. 2012  8 (7)  E1002809
The Role of Rice HEI10 in the Formation of Meiotic Crossovers
Wang K., Wang M., Tang D., Shen Y., Qin B., Li M., Cheng Z.
Mol. Biol. Cell 2011  22(1)  12-9
PAIR3, an axis-associated protein, is essential for the recruitment of recombination elements onto meiotic chromosomes in rice.
Deveshwar P., Bovill W.D., Sharma R., Able J.A., Kapoor S.
BMC Plant Biol. 2011  11  78
Analysis of anther transcriptomes to identify genes contributing to meiosis and male gametophyte development in rice.
Tang X., Zhang Z.-Y., Zhang W.-J., Zhao X.-M., Li X., Zhang D., Liu Q.-Q., Tang W.-H.
Plant Physiol. 2010  154(4)  1855-1870
Global gene profiling of laser-captured pollen mother cells indicates molecular pathways and gene subfamilies involved in rice meiosis.
Yuan W,Li X,Chang Y,Wen R,Chen G,Zhang Q,Wu C
Plant J. 2009  59  303-15
Mutation of the rice gene PAIR3 results in lack of bivalent formation in meiosis.
TextPresso Search Search textpresso for PAIR3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology leptotene( GO:0000237 )
nucleus( GO:0005634 )
nuclear chromosome( GO:0000228 )
zygotene( GO:0000238 )
synapsis( GO:0007129 )
megasporogenesis( GO:0009554 )
microsporogenesis( GO:0009556 )
Trait Ontology -
Plant Ontology -
Related Strains
Phenotype images
Last updated
Mar 18, 2018