Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol SPL28
Gene Symbol Synonym OsSPL28, PSL50, OsPSL50, AP1M1, OsAP1M1
CGSNL Gene Name SPOTTED LEAF 28
Gene Name Synonym premature senescence leaf 50, AP-1 complex subunit mu 1, clathrin-associated adaptor protein complex 1 medium subunit mu 1, "clathrin-associated adaptor protein complex 1, medium subunit mu 1 protein"
Protein Name CLATHRIN-ASSOCIATED ADAPTOR PROTEIN COMPLEX 1
Allele psl50, spl28
Chromosome No. 1
Explanation SPL28 is responsible for spotted leaf and early senescence in rice. Regulation of vesicular trafficking, Disease resistance. Q0JK13, NM_001050536. GO:1900056: negative regulation of leaf senescence. GO:0071588: hydrogen peroxide mediated signaling pathway. GO:1903426: regulation of reactive oxygen species biosynthetic process.
Trait Class Vegetative organ - Leaf
Tolerance and resistance - Lesion mimic
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK065538
MSU ID LOC_Os01g50770.1
LOC_Os01g50770.2
RAP ID Os01g0703600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Yao Y., Zhou J., Cheng C., Niu F., Zhang A., Sun B., Tu R., Wan J., Li Y., Huang Y., Xie K., Dai Y., Zhang H., Hong J.H., Pan X., Zhu J., Zhou H., Liu Z., Cao L., Chu H.
Plant Cell Environ. 2022  45(2)  542-555
A conserved clathrin-coated vesicle component, OsSCYL2, regulates plant innate immunity in rice.
He Y., Zhang X., Shi Y., Xu X., Li L., Wu J.L.
Rice (N Y) 2021  14(1)  53
PREMATURE SENESCENCE LEAF 50 Promotes Heat Stress Tolerance in Rice (Oryza sativa L.).
Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017  174(3)  1747-1763
A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
Qiao Y, Jiang W, Lee J, Park B, Choi MS, Piao R, Woo MO, Roh JH, Han L, Paek NC, Seo HS, Koh HJ.
New Phytol. 2010  185(1)  258-74.
SPL28 encodes a clathrin-associated adaptor protein complex 1, medium subunit micro 1 (AP1M1) and is responsible for spotted leaf and early senescence in rice (Oryza sativa).
TextPresso Search Search textpresso for SPL28 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology intracellular membrane-bounded organelle( GO:0043231 )
cytoplasmic vesicle( GO:0031410 )
clathrin adaptor complex( GO:0030131 )
vesicle-mediated transport( GO:0016192 )
intracellular protein transport( GO:0006886 )
regulation of cell death( GO:0010941 )
regulation of vesicle-mediated transport( GO:0060627 )
Golgi apparatus( GO:0005794 )
leaf senescence( GO:0010150 )
response to heat( GO:0009408 )
defense response( GO:0006952 )
Trait Ontology heat tolerance( TO:0000259 )
hydrogen peroxide content( TO:0000605 )
leaf senescence( TO:0000249 )
disease resistance( TO:0000112 )
chlorophyll content( TO:0000495 )
Plant Ontology 4 leaf senescence stage( PO:0001054 )
leaf( PO:0025034 )
Related Strains
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Phenotype images
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Last updated
Apr 27, 2022


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