Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
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| CGSNL Gene Symbol | SPL28 |
| Gene Symbol Synonym | OsSPL28, PSL50, OsPSL50, AP1M1, OsAP1M1 |
| CGSNL Gene Name | SPOTTED LEAF 28 |
| Gene Name Synonym | premature senescence leaf 50, AP-1 complex subunit mu 1, clathrin-associated adaptor protein complex 1 medium subunit mu 1, "clathrin-associated adaptor protein complex 1, medium subunit mu 1 protein" |
| Protein Name | CLATHRIN-ASSOCIATED ADAPTOR PROTEIN COMPLEX 1 |
| Allele | psl50, spl28 |
| Chromosome No. | 1 |
| Explanation | SPL28 is responsible for spotted leaf and early senescence in rice. Regulation of vesicular trafficking, Disease resistance. Q0JK13, NM_001050536. GO:1900056: negative regulation of leaf senescence. GO:0071588: hydrogen peroxide mediated signaling pathway. GO:1903426: regulation of reactive oxygen species biosynthetic process. |
| Trait Class |
Vegetative organ - Leaf
Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK065538
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| MSU ID |
LOC_Os01g50770.1
LOC_Os01g50770.2 |
| RAP ID |
Os01g0703600 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Yao Y., Zhou J., Cheng C., Niu F., Zhang A., Sun B., Tu R., Wan J., Li Y., Huang Y., Xie K., Dai Y., Zhang H., Hong J.H., Pan X., Zhu J., Zhou H., Liu Z., Cao L., Chu H.
Plant Cell Environ. 2022 45(2) 542-555 A conserved clathrin-coated vesicle component, OsSCYL2, regulates plant innate immunity in rice.
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Zhang A., Jiang H., Chu H., Cao L., Chen J.
Curr Issues Mol Biol 2022 44(5) 2350-2361 Rice lesion mimic Gene Cloning and Association Analysis for disease resistance.
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He Y., Zhang X., Shi Y., Xu X., Li L., Wu J.L.
Rice (N Y) 2021 14(1) 53 PREMATURE SENESCENCE LEAF 50 Promotes Heat Stress Tolerance in Rice (Oryza sativa L.).
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Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017 174(3) 1747-1763 A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
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Qiao Y, Jiang W, Lee J, Park B, Choi MS, Piao R, Woo MO, Roh JH, Han L, Paek NC, Seo HS, Koh HJ.
New Phytol. 2010 185(1) 258-74. SPL28 encodes a clathrin-associated adaptor protein complex 1, medium subunit micro 1 (AP1M1) and is responsible for spotted leaf and early senescence in rice (Oryza sativa).
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| TextPresso Search | Search textpresso for SPL28 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
necrotic cell death( GO:0070265 )
defense response to bacterium( GO:0042742 ) defense response to fungus( GO:0050832 ) post-Golgi vesicle-mediated transport( GO:0006892 ) callose localization( GO:0052545 ) intracellular membrane-bounded organelle( GO:0043231 ) cytoplasmic vesicle( GO:0031410 ) clathrin adaptor complex( GO:0030131 ) vesicle-mediated transport( GO:0016192 ) intracellular protein transport( GO:0006886 ) regulation of cell death( GO:0010941 ) regulation of vesicle-mediated transport( GO:0060627 ) Golgi apparatus( GO:0005794 ) leaf senescence( GO:0010150 ) response to heat( GO:0009408 ) defense response( GO:0006952 ) |
| Trait Ontology |
heat tolerance( TO:0000259 )
hydrogen peroxide content( TO:0000605 ) leaf senescence( TO:0000249 ) disease resistance( TO:0000112 ) chlorophyll content( TO:0000495 ) mimic response( TO:0000063 ) blast disease( TO:0000074 ) bacterial blight disease resistance( TO:0000175 ) |
| Plant Ontology |
4 leaf senescence stage( PO:0001054 )
leaf( PO:0025034 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Sep 20, 2022 | |
