Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ND1
Gene Symbol Synonym CSLD4, OsCSLD4, OsCD1, CD1, DNL3, OsDNL3, NRL1, OsNRL1, SPO1, OsSPO1, SPO1/OsCSLD4
CGSNL Gene Name NARROW LEAF AND DWARF 1
Gene Name Synonym CURLED LEAF AND DWARF 1, Dwarf and narrow-leaf 3, narrow and rolled leaf 1, SMALL PLANT AND ORGAN 1, cellulose synthase-like protein D4
Protein Name CELLULOSE SYNTHASE LIKE D4
Allele cd1, dnl3, nrl1, spo1
Chromosome No. 12
Explanation AF435644. ABA99552. AU078363, AU082165, AU082190, AU082189. Q2QNS6. CSLD4 is mainly expressed in rapidly growing tissues. CSLD4 is a Golgi-localized protein. CSLD4 mutation alters wall formation. TO:0000748: leaf morphology trait. PO:0030123: panicle inflorescence. GO:2000024: regulation of leaf development. TO:0006064: rolled leaf. TO:0000975: grain width. TO:0000820: leaf vein morphology trait. TO:0000821: leaf vein size.
Trait Class Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Reproductive organ - panicle
Coloration - Chlorophyll
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Expression
Sequence/Locus
cDNA Accession No. AK242601
MSU ID LOC_Os12g36890.1
RAP ID Os12g0555600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Qiao L., Wu Q., Yuan L., Huang X., Yang Y., Li Q., Shahzad N., Li H., Li W.
Int J Mol Sci 2023  24(23) 
<i>SMALL PLANT</i> AND <i>ORGAN 1</i> (<i>spo1</i>) Encoding a cellulose synthase-like protein D4 (OsCSLD4) Is an Important Regulator for Plant Architecture and Organ Size in Rice.
Ge L., Guo H., Li X., Tang M., Guo C., Bao H., Huang L., Yi Y., Cui Y., Chen L.
Front Plant Sci 2022  13  863233
OsSIDP301, a Member of the DUF1644 Family, Negatively Regulates Salt Stress and grain size in Rice.
Qi D., Wen Q., Meng Z., Yuan S., Guo H., Zhao H., Cui S.
Plant J. 2020  104(4)  901-916
OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa.
Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020  21(4) 
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
Xiao Y., You S., Kong W., Tang Q., Bai W., Cai Y., Zheng H., Wang C., Jiang L., Wang C., Zhao Z., Wan J.
Plant Mol. Biol. 2019  101(4-5)  403-414
A GARP transcription factor anther dehiscence defected 1 (Osadd1) regulates rice anther dehiscence.
Zhou Y., Wang D., Wu T., Yang Y., Liu C., Yan L., Tang D., Zhao X., Zhu Y., Lin J., Liu X.
Molecular Breeding 2018  38 
LRRK1, a receptor-like cytoplasmic kinase, regulates leaf rolling through modulating bulliform cell development in rice
Shi L., Wei X.J., Adedze Y.M., Sheng Z.H., Tang S.Q., Hu P.S., Wang J.L.
Genet. Mol. Res. 2016  15(3) 
Characterization and gene cloning of the rice (Oryza sativa L.) dwarf and narrow-leaf mutant DNL3.
Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H., Chen K.M.
Rice (N Y) 2016  9(1)  37
rel2, A Gene Encoding An Unknown Function Protein which Contains DUF630 and DUF632 Domains Controls leaf rolling in Rice.
Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013  73(6)  966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
Luan W. , Liu Y. , Zhang F. , Song Y. , Wang Z. , Peng Y. , Sun Z.
Plant Biotechnol J. 2011  9(4)  513-24
OsCD1 encodes a putative member of the cellulose synthase-like D sub-family and is essential for rice plant architecture and growth.
Wang L., Guo K., Li Y., Tu Y., Hu H., Wang B., Cui X., Peng L.
BMC Plant Biol. 2010  10  282
Expression profiling and integrative analysis of the CESA/CSL superfamily in rice.
Hu J., Zhu L., Zeng D., Gao Z., Guo L., Fang Y., Zhang G., Dong G., Yan M., Liu J., Qian Q.
Plant Mol. Biol. 2010  73(3)  283-92
Identification and characterization of NARROW ANDROLLED LEAF 1, a novel gene regulating leaf morphology and plant architecture in rice
Li M,Xiong G,Li R,Cui J,Tang D,Zhang B,Pauly M,Cheng Z,Zhou Y
Plant J. 2009  60(6)  1055-69
Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth.
Hazen,S.P., Scott-Craig,J.S. and Walton,J.D.
Plant Physiol. 2002  128(2)  336-340
Cellulose synthase-like genes of rice.
TextPresso Search Search textpresso for ND1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of hormone levels( GO:0010817 )
hormone-mediated signaling( GO:0009755 )
cytokinin mediated signaling( GO:0009736 )
abscisic acid mediated signaling( GO:0009738 )
auxin mediated signaling pathway( GO:0009734 )
regulation of cell cycle( GO:0051726 )
leaf development( GO:0048366 )
response to heat( GO:0009408 )
response to oxidative stress( GO:0006979 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to jasmonic acid stimulus( GO:0009753 )
response to auxin stimulus( GO:0009733 )
response to abscisic acid stimulus( GO:0009737 )
regulation of cell growth( GO:0001558 )
regulation of cell division( GO:0051302 )
cell division( GO:0051301 )
gibberellic acid mediated signaling( GO:0009740 )
response to gibberellin stimulus( GO:0009739 )
developmental process( GO:0032502 )
cellulose synthase (UDP-forming) activity( GO:0016760 )
integral to membrane( GO:0016021 )
cell wall organization( GO:0007047 )
Golgi membrane( GO:0000139 )
cellulose biosynthetic process( GO:0030244 )
Trait Ontology plant height( TO:0000207 )
leaf width( TO:0000370 )
gibberellic acid sensitivity( TO:0000166 )
internode length( TO:0000145 )
vascular bundle number( TO:0000472 )
leaf shape( TO:0000492 )
auxin content( TO:0002672 )
abscisic acid content( TO:0002667 )
gibberellic acid content( TO:0002675 )
cytokinin content( TO:0002660 )
leaf curling( TO:0002681 )
tiller number( TO:0000346 )
leaf length( TO:0000135 )
grain size( TO:0000397 )
leaf angle( TO:0000206 )
1000-seed weight( TO:0000382 )
panicle length( TO:0000040 )
fertility related trait( TO:0000420 )
chlorophyll-a content( TO:0000293 )
growth and development trait( TO:0000357 )
abscisic acid sensitivity( TO:0000615 )
auxin sensitivity( TO:0000163 )
jasmonic acid sensitivity( TO:0000172 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
heat tolerance( TO:0000259 )
oxidative stress( TO:0002657 )
leaf development trait( TO:0000655 )
root length( TO:0000227 )
adventitious root number( TO:0001006 )
Plant Ontology root( PO:0009005 )
leaf sheath( PO:0020104 )
leaf development stage( PO:0001050 )
Related Strains
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Phenotype images
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Last updated
May 24, 2024


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