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Basic Information
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CGSNL Gene Symbol
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ND1
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Gene Symbol Synonym
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CSLD4, OsCSLD4, OsCD1, CD1, DNL3, OsDNL3, NRL1, OsNRL1, SPO1, OsSPO1, SPO1/OsCSLD4, OsND1, DNL1, OsDNL1
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CGSNL Gene Name
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NARROW LEAF AND DWARF 1
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Gene Name Synonym
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CURLED LEAF AND DWARF 1, Dwarf and narrow-leaf 3, narrow and rolled leaf 1, SMALL PLANT AND ORGAN 1, cellulose synthase-like protein D4, narrow leaf and dwarf1, Dwarf and Narrowed Leaf 1
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Protein Name
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CELLULOSE SYNTHASE LIKE D4
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Allele
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cd1, dnl3, nrl1, spo1, nd1
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Chromosome No.
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12
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Explanation
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AF435644. ABA99552. AU078363, AU082165, AU082190, AU082189. Q2QNS6. CSLD4 is mainly expressed in rapidly growing tissues. CSLD4 is a Golgi-localized protein. CSLD4 mutation alters wall formation. AtCSLD5 orthologue. DNL1 in Ding et al. 2014. TO:0000748: leaf morphology trait. PO:0030123: panicle inflorescence. GO:2000024: regulation of leaf development. TO:0006064: rolled leaf. TO:0000975: grain width. TO:0000820: leaf vein morphology trait. TO:0000821: leaf vein size. TO:0000919: grain weight.
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Trait Class
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Biochemical character
Vegetative organ - Leaf
Vegetative organ - Culm
Vegetative organ - Root
Coloration - Chlorophyll
Character as QTL - Yield and productivity
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Reproductive organ - panicle
Seed - Morphological traits - Grain shape
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK242601
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MSU ID
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LOC_Os12g36890.1
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RAP ID
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Os12g0555600
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Lan M., Zhu Y., Peaucelle A., Zhu X., Liu Y., Cao X., Gurzadyan A., Gao G., Cai W., Gruel J., Haas K.T., Jönsson H., Hamant O., Wightman R., Meyerowitz E., Yang W.
Nat Commun 2025 16(1) 7229
CSLD5-mediated cell wall remodelling regulates tissue mechanics and shoot meristem growth.
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Qiao L., Wu Q., Yuan L., Huang X., Yang Y., Li Q., Shahzad N., Li H., Li W.
Int J Mol Sci 2023 24(23)
<i>SMALL PLANT</i> AND <i>ORGAN 1</i> (<i>spo1</i>) Encoding a cellulose synthase-like protein D4 (OsCSLD4) Is an Important Regulator for Plant Architecture and Organ Size in Rice.
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Chen Y., Qi H., Yang L., Xu L., Wang J., Guo J., Zhang L., Tan Y., Pan R., Shu Q., Qian Q., Song S.
Cell Rep 2023 42(7) 112702
The OsbHLH002/OsICE1-OSH1 module orchestrates secondary cell wall formation in rice.
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Ge L., Guo H., Li X., Tang M., Guo C., Bao H., Huang L., Yi Y., Cui Y., Chen L.
Front Plant Sci 2022 13 863233
OsSIDP301, a Member of the DUF1644 Family, Negatively Regulates Salt Stress and grain size in Rice.
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Zhao H., Li Z., Wang Y., Wang J., Xiao M., Liu H., Quan R., Zhang H., Huang R., Zhu L., Zhang Z.
Plant Biotechnol. J. 2021
Cellulose synthase-like protein OsCSLD4 plays an important role in the response of rice to salt stress by mediating abscisic acid biosynthesis to regulate osmotic stress tolerance.
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Wang H., Shi Y., Zhang X., Xu X., Wu J.L.
Int J Mol Sci 2020 21(4)
Characterization of a Novel Rice Dynamic Narrow-rolled leaf Mutant with Deficiencies in Aromatic Amino Acids.
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Qi D., Wen Q., Meng Z., Yuan S., Guo H., Zhao H., Cui S.
Plant J. 2020 104(4) 901-916
OsLFR is essential for early endosperm and embryo development by interacting with SWI/SNF complex members in Oryza sativa.
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Xiao Y., You S., Kong W., Tang Q., Bai W., Cai Y., Zheng H., Wang C., Jiang L., Wang C., Zhao Z., Wan J.
Plant Mol. Biol. 2019 101(4-5) 403-414
A GARP transcription factor anther dehiscence defected 1 (Osadd1) regulates rice anther dehiscence.
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Zhou Y., Wang D., Wu T., Yang Y., Liu C., Yan L., Tang D., Zhao X., Zhu Y., Lin J., Liu X.
Molecular Breeding 2018 38
LRRK1, a receptor-like cytoplasmic kinase, regulates leaf rolling through modulating bulliform cell development in rice
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Shi L., Wei X.J., Adedze Y.M., Sheng Z.H., Tang S.Q., Hu P.S., Wang J.L.
Genet. Mol. Res. 2016 15(3)
Characterization and gene cloning of the rice (Oryza sativa L.) dwarf and narrow-leaf mutant DNL3.
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Yang S.Q., Li W.Q., Miao H., Gan P.F., Qiao L., Chang Y.L., Shi C.H., Chen K.M.
Rice (N Y) 2016 9(1) 37
rel2, A Gene Encoding An Unknown Function Protein which Contains DUF630 and DUF632 Domains Controls leaf rolling in Rice.
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Ding Z., Lin Z., Li Q., Wu H., Xiang C., Wang J.
Biochem. Biophys. Res. Commun. 2014
DNL1, encodes cellulose synthase-like D4, is a major QTL for plant height and leaf width in rice (Oryza sativa L.).
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Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013 73(6) 966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
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Luan W. , Liu Y. , Zhang F. , Song Y. , Wang Z. , Peng Y. , Sun Z.
Plant Biotechnol J. 2011 9(4) 513-24
OsCD1 encodes a putative member of the cellulose synthase-like D sub-family and is essential for rice plant architecture and growth.
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Wang L., Guo K., Li Y., Tu Y., Hu H., Wang B., Cui X., Peng L.
BMC Plant Biol. 2010 10 282
Expression profiling and integrative analysis of the CESA/CSL superfamily in rice.
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Hu J., Zhu L., Zeng D., Gao Z., Guo L., Fang Y., Zhang G., Dong G., Yan M., Liu J., Qian Q.
Plant Mol. Biol. 2010 73(3) 283-92
Identification and characterization of NARROW ANDROLLED LEAF 1, a novel gene regulating leaf morphology and plant architecture in rice
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Li M,Xiong G,Li R,Cui J,Tang D,Zhang B,Pauly M,Cheng Z,Zhou Y
Plant J. 2009 60(6) 1055-69
Rice cellulose synthase-like D4 is essential for normal cell-wall biosynthesis and plant growth.
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Hazen,S.P., Scott-Craig,J.S. and Walton,J.D.
Plant Physiol. 2002 128(2) 336-340
Cellulose synthase-like genes of rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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Golgi membrane( GO:0000139 )
cellulose biosynthetic process( GO:0030244 )
cell wall organization( GO:0007047 )
integral to membrane( GO:0016021 )
cellulose synthase (UDP-forming) activity( GO:0016760 )
developmental process( GO:0032502 )
response to gibberellin stimulus( GO:0009739 )
gibberellic acid mediated signaling( GO:0009740 )
cell division( GO:0051301 )
response to heat( GO:0009408 )
response to oxidative stress( GO:0006979 )
regulation of inflorescence meristem growth( GO:0010081 )
regulation of abscisic acid biosynthetic process( GO:0010115 )
response to osmotic stress( GO:0006970 )
leaf development( GO:0048366 )
regulation of cell cycle( GO:0051726 )
auxin mediated signaling pathway( GO:0009734 )
abscisic acid mediated signaling( GO:0009738 )
cytokinin mediated signaling( GO:0009736 )
hormone-mediated signaling( GO:0009755 )
regulation of hormone levels( GO:0010817 )
regulation of cell division( GO:0051302 )
regulation of cell growth( GO:0001558 )
response to abscisic acid stimulus( GO:0009737 )
response to auxin stimulus( GO:0009733 )
response to jasmonic acid stimulus( GO:0009753 )
response to salt stress( GO:0009651 )
response to water deprivation( GO:0009414 )
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Trait Ontology
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abscisic acid sensitivity( TO:0000615 )
growth and development trait( TO:0000357 )
chlorophyll-a content( TO:0000293 )
fertility related trait( TO:0000420 )
panicle length( TO:0000040 )
1000-seed weight( TO:0000382 )
leaf angle( TO:0000206 )
grain size( TO:0000397 )
leaf length( TO:0000135 )
tiller number( TO:0000346 )
leaf curling( TO:0002681 )
cytokinin content( TO:0002660 )
grain weight( TO:0000590 )
grain width( TO:0000402 )
osmotic response sensitivity( TO:0000095 )
plant height( TO:0000207 )
leaf width( TO:0000370 )
gibberellic acid sensitivity( TO:0000166 )
auxin sensitivity( TO:0000163 )
gibberellic acid content( TO:0002675 )
abscisic acid content( TO:0002667 )
auxin content( TO:0002672 )
leaf shape( TO:0000492 )
primary branch number( TO:0000547 )
secondary branch number( TO:0000557 )
grain number( TO:0002759 )
filled grain number( TO:0000447 )
grain yield( TO:0000396 )
adventitious root number( TO:0001006 )
root length( TO:0000227 )
leaf development trait( TO:0000655 )
oxidative stress( TO:0002657 )
heat tolerance( TO:0000259 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
jasmonic acid sensitivity( TO:0000172 )
vascular bundle number( TO:0000472 )
internode length( TO:0000145 )
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Plant Ontology
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root( PO:0009005 )
leaf sheath( PO:0020104 )
leaf development stage( PO:0001050 )
epidermis( PO:0005679 )
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Related Strains
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Phenotype images
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Last updated
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Jan 15, 2026
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Update info.