Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol GAPC
Gene Symbol Synonym OsGapC3, OGapC3, OsGAPDH1, GAPDH1, OsGapC1
CGSNL Gene Name GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC
Gene Name Synonym glyceraldehydes-3-phosphate dehydrogenase, cytosolic GAPDH3, cytosolic glyceraldehyde-3-phosphate dehydrogenase 3
Protein Name GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE, CYTOSOLIC
Allele gapdh1
Chromosome No. 8
Explanation Q0J8A4, A2YQT7. U31676. BGIOSGA027913. GAPDH1 in Zhang et al. 2017. OsGapC1 in Wierbowski et al. 2020. OsGAPC3 in Zhang et al. 2011, Xu 2023.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK071097
MSU ID LOC_Os08g03290.1
LOC_Os08g03290.2
LOC_Os08g03290.3
LOC_Os08g03290.4
RAP ID Os08g0126300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Xu Z.
Adv Biol (Weinh) 2023    e2300106
A Specific Protective Mechanism Against Chloroplast Photo-Reactive Oxygen Species in Phosphate-Starved Rice Plants.
Zhou S., Huang K., Zhou Y., Hu Y., Xiao Y., Chen T., Yin M., Liu Y., Xu M., Jiang X.
BMC Plant Biol. 2022  22(1)  269
Degradome sequencing reveals an integrative miRNA-mediated gene interaction network regulating rice seed vigor.
Chen Z., Wang Y., Huang R., Zhang Z., Huang J., Yu F., Lin Y., Guo Y., Liang K., Zhou Y., Chen F.
BMC Plant Biol. 2022  22(1)  137
Integration of transcriptomic and proteomic analyses reveals several levels of metabolic regulation in the excess starch and early senescent leaf mutant LSES1 in rice.
Wierbowski S.D., Vo T.V., Falter-Braun P., Jobe T.O., Kruse L.H., Wei X., Liang J., Meyer M.J., Akturk N., Rivera-Erick CA., Cordero N.A., Paramo M.I., Shayhidin E.E., Bertolotti M., Tippens N.D., Akther K., Sharma R., Katayose Y., Salehi-Ashtiani K., Hao T., Ronald P.C., Ecker J.R., Schweitzer P.A., Kikuchi S., Mizuno H., Hill D.E., Vidal M., Moghe G.D., McCouch S.R., Yu H.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(21)  11836-11842
A massively parallel barcoded sequencing pipeline enables generation of the first ORFeome and interactome map for rice.
Zhang H., Zhao Y., Zhou D.X.
Nucleic Acids Res. 2017  45(21)  12241-12255
Rice NAD+-dependent histone deacetylase OsSRT1 represses glycolysis and regulates the moonlighting function of GAPDH as a transcriptional activator of glycolytic genes.
Swain D.M., Sahoo R.K., Srivastava V.K., Tripathy B.C., Tuteja R., Tuteja N.
Planta 2016   
Function of heterotrimeric G-protein gamma subunit RGG1 in providing salinity stress tolerance in rice by elevating detoxification of ROS.
Nishizawa Y., Mochizuki S., Koiwai H., Kondo K., Kishimoto K., Katoh E., Minami E.
Plant Signal Behav 2015  10(3)  e990801
Rice ubiquitin ligase EL5 prevents root meristematic cell death under high nitrogen conditions and interacts with a cytosolic GAPDH.
Xiu-Hong Zhang, Xiao-Lan Rao, Hai-Tao Shi, Rong-Jun Li, Ying-Tang Lu
Plant Cell Tiss Organ Cult 2011  107(1) 
Overexpression of a cytosolic glyceraldehyde-3-phosphate dehydrogenase gene OsGAPC3 confers salt tolerance in rice
Md Monowar Karim Khan, Jan A., Karibe H., Komatsu S.
Plant Molecular Biology 2005  58(1)  27-40
Identification of phosphoproteins regulated by gibberellin in rice leaf sheath.
TextPresso Search Search textpresso for GAPC ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology cell redox homeostasis( GO:0045454 )
response to herbicide( GO:0009635 )
response to abscisic acid stimulus( GO:0009737 )
response to heat( GO:0009408 )
response to salt stress( GO:0009651 )
response to osmotic stress( GO:0006970 )
glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity( GO:0004365 )
cytoplasm( GO:0005737 )
glycolysis( GO:0006096 )
NAD or NADH binding( GO:0051287 )
oxidation reduction( GO:0055114 )
response to abiotic stimulus( GO:0009628 )
nucleus( GO:0005634 )
Trait Ontology abiotic stress trait( TO:0000168 )
germination rate( TO:0000430 )
osmotic response sensitivity( TO:0000095 )
herbicide sensitivity( TO:0000058 )
salt tolerance( TO:0006001 )
heat tolerance( TO:0000259 )
abscisic acid sensitivity( TO:0000615 )
hydrogen peroxide content( TO:0000605 )
Plant Ontology shoot system( PO:0009006 )
root( PO:0009005 )
leaf( PO:0025034 )
flower( PO:0009046 )
Related Strains
-
Phenotype images
-
Last updated
Dec 26, 2023

/rice/oryzabase