Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CAX3
Gene Symbol Synonym OsCAX3, CAX6, OsNCX9, OsNCX9.1, OsNCX9.2, NCX9
CGSNL Gene Name Ca(2+)/H(+) EXCHANGER 3
Gene Name Synonym Vacuolar cation/proton exchanger 3, Ca(2+)/H(+) exchanger 3, cation/H+ exchanger 3, Na+/Ca2+ Exchanger 9, Sodium/calcium exchanger 9
Protein Name Ca(2+)/H(+) EXCHANGER 3
Allele
Chromosome No. 4
Explanation LOC_Os04g55940. AB112773. Q6K1C4. CAX6 in Singh et al. 2013. Oryza barthii: ObarCAX3: OBART04G27810, Oryza brachyantha: ObraCAX3: OB04G34750, Oryza glaberrima: OglaCAX3: ORGLA04G0240500, Oryza glumipatula: OgluCAX3: OGLUM04G27670, Oryza longistaminata: OlCAX3: OLONG_021212, Oryza meridionalis: OmCAX3: OMERI04G23200, Oryza nivara: OnCAX3: ONIVA04G26230, Oryza punctata: OpCAX3: OPUNC04G25220, Oryza rufipogon: OrCAX3: ORUFI04G29410.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK073795
MSU ID LOC_Os04g55940.1
LOC_Os04g55940.2
RAP ID Os04g0653200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Pittman J.K., Hirschi K.D.
Rice (N Y) 2016  9(1)  3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015  566(1)  37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015  8(1)  54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Kamiya T., Akahori T., Maeshima M.
Plant & cell physiology 2005  46(10)  1735-40
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.
TextPresso Search Search textpresso for CAX3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology calcium ion binding( GO:0005509 )
vacuole( GO:0005773 )
calcium ion transport( GO:0006816 )
cation transmembrane transporter activity( GO:0008324 )
antiporter activity( GO:0015297 )
transmembrane transport( GO:0055085 )
response to UV( GO:0009411 )
response to calcium ion( GO:0051592 )
integral to membrane( GO:0016021 )
Trait Ontology UV light sensitivity( TO:0000160 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jul 25, 2016


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