Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CAX3
Gene Symbol Synonym OsCAX3, CAX6, OsNCX9, OsNCX9.1, OsNCX9.2, NCX9
CGSNL Gene Name Ca(2+)/H(+) EXCHANGER 3
Gene Name Synonym Vacuolar cation/proton exchanger 3, Ca(2+)/H(+) exchanger 3, cation/H+ exchanger 3, Na+/Ca2+ Exchanger 9, Sodium/calcium exchanger 9, cation exchanger 3
Protein Name Ca(2+)/H(+) EXCHANGER 3
Allele
Chromosome No. 4
Explanation AB112773. Q6K1C4. CAX6 in Singh et al. 2013. Oryza barthii: ObarCAX3: OBART04G27810, Oryza brachyantha: ObraCAX3: OB04G34750, Oryza glaberrima: OglaCAX3: ORGLA04G0240500, Oryza glumipatula: OgluCAX3: OGLUM04G27670, Oryza longistaminata: OlCAX3: OLONG_021212, Oryza meridionalis: OmCAX3: OMERI04G23200, Oryza nivara: OnCAX3: ONIVA04G26230, Oryza punctata: OpCAX3: OPUNC04G25220, Oryza rufipogon: OrCAX3: ORUFI04G29410.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK073795
MSU ID LOC_Os04g55940.1
LOC_Os04g55940.2
RAP ID Os04g0653200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Lian S., Chen Y., Zhou Y., Feng T., Chen J., Liang L., Qian Y., Huang T., Zhang C., Wu F., Zou W., Li Z., Meng L., Li M.
Sci Rep 2024  14(1)  8642
Functional differentiation and genetic diversity of rice cation exchanger (CAX) genes and their potential use in rice improvement.
Zou W., Chen J., Meng L., Chen D., He H., Ye G.
Int J Mol Sci 2021  22(15) 
The Rice Cation/H+ Exchanger Family Involved in Cd Tolerance and Transport.
Pittman J.K., Hirschi K.D.
Rice (N Y) 2016  9(1)  3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015  8(1)  54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015  566(1)  37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Kamiya T., Akahori T., Maeshima M.
Plant & cell physiology 2005  46(10)  1735-40
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.
TextPresso Search Search textpresso for CAX3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to gibberellin stimulus( GO:0009739 )
response to abscisic acid stimulus( GO:0009737 )
response to jasmonic acid stimulus( GO:0009753 )
response to water deprivation( GO:0009414 )
response to deep water( GO:0030912 )
response to aluminum ion( GO:0010044 )
response to cadmium ion( GO:0046686 )
calcium ion binding( GO:0005509 )
vacuole( GO:0005773 )
calcium ion transport( GO:0006816 )
cation transmembrane transporter activity( GO:0008324 )
antiporter activity( GO:0015297 )
transmembrane transport( GO:0055085 )
response to UV( GO:0009411 )
response to calcium ion( GO:0051592 )
integral to membrane( GO:0016021 )
Trait Ontology UV light sensitivity( TO:0000160 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
cold tolerance( TO:0000303 )
phosphorus sensitivity( TO:0000102 )
jasmonic acid sensitivity( TO:0000172 )
abscisic acid sensitivity( TO:0000615 )
submergence tolerance( TO:0000524 )
nitrogen sensitivity( TO:0000011 )
aluminum sensitivity( TO:0000354 )
gibberellic acid sensitivity( TO:0000166 )
Plant Ontology root( PO:0009005 )
leaf( PO:0025034 )
lateral root( PO:0020121 )
primary root( PO:0020127 )
whole plant( PO:0000003 )
whole plant development stage( PO:0007033 )
Related Strains
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Phenotype images
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Last updated
Sep 13, 2024

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