Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CAX1B
Gene Symbol Synonym OsCAX1b, CAX1b, CAX3, OsNCX10, NCX10
CGSNL Gene Name Ca(2+)/H(+) EXCHANGER 1B
Gene Name Synonym Vacuolar cation/proton exchanger 1b, Ca(2+)/H(+) exchanger 1b, cation/H+ exchanger 1b, Na+/Ca2+ Exchanger 10, Sodium/calcium exchanger 10
Protein Name Ca(2+)/H(+) EXCHANGER 1B
Allele
Chromosome No. 5
Explanation AB112770. Q5TKG3. CAX3 in Singh et al. 2013. Oryza barthii: ObarCAX1b: OBART05G28070/OBART05G28050, Oryza brachyantha: ObraCAX1b: OB05G35550, Oryza glaberrima: OglaCAX1b: ORGLA05G0244200, Oryza glumipatula: OgluCAX1b: OGLUM05G29480, Oryza longistaminata: OlCAX1b: OLONG_007971, Oryza meridionalis: OmCAX1b: OMERI05G23910, Oryza nivara: OnCAX1b: ONIVA05G29950, Oryza punctata: OpCAX1b: OPUNC05G25670, Oryza rufipogon: OrCAX1b: ORUFI05G30040.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK069021
MSU ID LOC_Os05g51610.1
RAP ID Os05g0594200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Wang Y., Huang L., Du F., Wang J., Zhao X., Li Z., Wang W., Xu J., Fu B.
Sci Rep 2021  11(1)  5166
Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice.
Zou W., Chen J., Meng L., Chen D., He H., Ye G.
Int J Mol Sci 2021  22(15) 
The Rice Cation/H+ Exchanger Family Involved in Cd Tolerance and Transport.
Pittman J.K., Hirschi K.D.
Rice (N Y) 2016  9(1)  3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015  8(1)  54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015  566(1)  37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014  281(3)  894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
Kamiya T., Akahori T., Maeshima M.
Plant & cell physiology 2005  46(10)  1735-40
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.
TextPresso Search Search textpresso for CAX1B ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cadmium ion( GO:0046686 )
calcium ion binding( GO:0005509 )
vacuole( GO:0005773 )
calcium ion transport( GO:0006816 )
cation transmembrane transporter activity( GO:0008324 )
antiporter activity( GO:0015297 )
integral to membrane( GO:0016021 )
response to UV( GO:0009411 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to calcium ion( GO:0051592 )
transmembrane transport( GO:0055085 )
Trait Ontology UV light sensitivity( TO:0000160 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
Plant Ontology root( PO:0009005 )
leaf( PO:0025034 )
root tip( PO:0000025 )
Related Strains
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Phenotype images
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Last updated
Mar 4, 2022


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