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Basic Information
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CGSNL Gene Symbol
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CAX1B
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Gene Symbol Synonym
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OsCAX1b, CAX1b, CAX3, OsNCX10, NCX10
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CGSNL Gene Name
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Ca(2+)/H(+) EXCHANGER 1B
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Gene Name Synonym
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Vacuolar cation/proton exchanger 1b, Ca(2+)/H(+) exchanger 1b, cation/H+ exchanger 1b, Na+/Ca2+ Exchanger 10, Sodium/calcium exchanger 10, cation exchanger 1b
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Protein Name
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Ca(2+)/H(+) EXCHANGER 1B
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Allele
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Chromosome No.
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5
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Explanation
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AB112770. Q5TKG3. CAX3 in Singh et al. 2013. Oryza barthii: ObarCAX1b: OBART05G28070/OBART05G28050, Oryza brachyantha: ObraCAX1b: OB05G35550, Oryza glaberrima: OglaCAX1b: ORGLA05G0244200, Oryza glumipatula: OgluCAX1b: OGLUM05G29480, Oryza longistaminata: OlCAX1b: OLONG_007971, Oryza meridionalis: OmCAX1b: OMERI05G23910, Oryza nivara: OnCAX1b: ONIVA05G29950, Oryza punctata: OpCAX1b: OPUNC05G25670, Oryza rufipogon: OrCAX1b: ORUFI05G30040. TO:0000975: grain width.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK069021
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MSU ID
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LOC_Os05g51610.1
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RAP ID
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Os05g0594200
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cao S., Chen K., Lu K., Chen S., Zhang X., Shen C., Zhu S., Niu Y., Fan L., Chen Z.J., Xu J., Song Q.
Plant Cell 2023
Asymmetric variation in DNA methylation during domestication and de-domestication of rice.
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Wang Y., Huang L., Du F., Wang J., Zhao X., Li Z., Wang W., Xu J., Fu B.
Sci Rep 2021 11(1) 5166
Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice.
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Zou W., Chen J., Meng L., Chen D., He H., Ye G.
Int J Mol Sci 2021 22(15)
The Rice Cation/H+ Exchanger Family Involved in Cd Tolerance and Transport.
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Pittman J.K., Hirschi K.D.
Rice (N Y) 2016 9(1) 3
Phylogenetic analysis and protein structure modelling identifies distinct Ca(2+)/Cation antiporters and conservation of gene family structure within Arabidopsis and rice species.
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Singh A.K., Kumar R., Tripathi A.K., Gupta B.K., Pareek A., Singla-Pareek SL.
Rice (N Y) 2015 8(1) 54
Genome-wide investigation and expression analysis of Sodium/Calcium exchanger gene family in rice and Arabidopsis.
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Singh U.M., Metwal M., Singh M., Taj G., Kumar A.
Gene 2015 566(1) 37-46
Identification and characterization of calcium transporter gene family in finger millet in relation to grain calcium content.
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Singh A., Kanwar P., Yadav A.K., Mishra M., Jha S.K., Baranwal V., Pandey A., Kapoor S., Tyagi A.K., Pandey G.K.
FEBS J. 2014 281(3) 894-915
Genome-wide expressional and functional analysis of calcium transport elements during abiotic stress and development in rice.
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Kamiya T., Akahori T., Maeshima M.
Plant & cell physiology 2005 46(10) 1735-40
Expression profile of the genes for rice cation/H+ exchanger family and functional analysis in yeast.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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photoperiodism, flowering( GO:0048573 )
response to abscisic acid stimulus( GO:0009737 )
response to jasmonic acid stimulus( GO:0009753 )
response to deep water( GO:0030912 )
response to aluminum ion( GO:0010044 )
response to cadmium ion( GO:0046686 )
calcium ion binding( GO:0005509 )
vacuole( GO:0005773 )
calcium ion transport( GO:0006816 )
cation transmembrane transporter activity( GO:0008324 )
antiporter activity( GO:0015297 )
integral to membrane( GO:0016021 )
response to UV( GO:0009411 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
response to calcium ion( GO:0051592 )
transmembrane transport( GO:0055085 )
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Trait Ontology
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UV light sensitivity( TO:0000160 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
phosphorus sensitivity( TO:0000102 )
abscisic acid sensitivity( TO:0000615 )
submergence tolerance( TO:0000524 )
nitrogen sensitivity( TO:0000011 )
aluminum sensitivity( TO:0000354 )
jasmonic acid sensitivity( TO:0000172 )
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Plant Ontology
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root( PO:0009005 )
leaf( PO:0025034 )
root tip( PO:0000025 )
seedling development stage( PO:0007131 )
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Related Strains
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Phenotype images
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Last updated
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Feb 21, 2025
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Update info.