Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIN9
Gene Symbol Synonym OsPIN9
CGSNL Gene Name PIN PROTEIN 9
Gene Name Synonym
Protein Name PIN PROTEIN 9
Allele
Chromosome No. 1
Explanation BR000838. GO:1901698: response to nitrogen compound. GO:0060918: auxin transport. GO:2000377: regulation of reactive oxygen species metabolic process. GO:1903426: regulation of reactive oxygen species biosynthetic process.
Trait Class Biochemical character
Vegetative organ - Culm
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Expression
Sequence/Locus
cDNA Accession No. AK059229
MSU ID LOC_Os01g58860.1
RAP ID Os01g0802700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Cui J., Nishide N., Mashiguchi K., Kuroha K., Miya M., Sugimoto K., Itoh J.I., Yamaguchi S., Izawa T.
Nat Commun 2023  14(1)  3191
Fertilization controls tiller numbers via transcriptional regulation of a MAX1-like gene in rice cultivation.
Ouyang Q., Zhang Y., Yang X., Yang C., Hou D., Liu H., Xu H.
Plants (Basel) 2023  12(15) 
Overexpression of <i>OsPIN9</i> Impairs Chilling Tolerance via Disturbing ROS Homeostasis in Rice.
Huang Z.H., Bao K., Jing Z.H., Wang Q., Duan H.F., Zhang S., Tao W.W., Wu Q.N.
Front Plant Sci 2022  13  931063
Euryale <i>Small Auxin Up RNA62</i> promotes cell elongation and seed size by altering the distribution of indole-3-acetic acid under the light.
Wang H.Q., Xuan W., Huang X.Y., Mao C., Zhao F.J.
Plant Cell Physiol. 2021  62(1)  166-177
Cadmium Inhibits lateral root Emergence in Rice by Disrupting OsPIN-mediated Auxin Distribution and the Protective Effect of OsHMA3.
Yang J., Ji L., Liu S., Jing P., Hu J., Jin D., Wang L., Xie G.
J. Exp. Bot. 2021   
The CaM1-Associated CCaMK-MKK1/6 cascade positively affects the lateral root growth through auxin signaling under salt stress in rice.
Pan J., Li Z., Wang Q., Yang L., Yao F., Liu W.
Plant Sci. 2020  290  110318
An S-domain receptor-like kinase, OsESG1, regulates early crown root development and drought resistance in rice.
Zhao Y.F., Peng T., Sun H.Z., Teotia S., Wen H.L., Du Y.X., Zhang J., Li J.Z., Tang G.L., Xue H.W., Zhao Q.Z.
Plant Biotechnol. J. 2019  17(4)  712-723
miR1432-OsACOT (Acyl-CoA thioesterase) module determines grain yield via enhancing grain filling rate in rice.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017  68(17)  4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
Zhou S., Jiang W., Long F., Cheng S., Yang W., Zhao Y., Zhou D.X.
Plant Cell 2017  29(5)  1088-1104
Rice Homeodomain Protein WOX11 Recruits a Histone Acetyltransferase Complex to Establish Programs of Cell Proliferation of crown root Meristem.
Singh P., Mohanta T.K., Sinha A.K.
PLoS ONE 2015  10(4)  e0123620
Unraveling the Intricate Nexus of Molecular Mechanisms Governing Rice Root Development: OsMPK3/6 and Auxin-Cytokinin Interplay.
Xu J., Zha M., Li Y., Ding Y., Chen L., Ding C., Wang S.
Plant Cell Rep. 2015  34(9)  1647-62
The interaction between nitrogen availability and auxin, cytokinin, and strigolactone in the control of shoot branching in rice (Oryza sativa L.).
Zou Y., Liu X., Wang Q., Chen Y., Liu C., Qiu Y., Zhang W.
Biochim. Biophys. Acta 2014  1840(6)  1676-1685
OsRPK1, a novel leucine-rich repeat receptor-like kinase, negatively regulates polar auxin transport and root development in rice.
Miyashita Y., Takasugi T., Ito Y.
Plant Science 2010  178  424-428
Identification and expression analysis of PIN genes in rice
ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010  277(14)  2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
Liu S., Wang J., Wang L., Wang X., Xue Y., WU P., Shou H.
Cell Res. 2009  19(9)  1110-9
Adventitious root formation in rice requires OsGNOM1 and is mediated by the OsPINs family.
Wang JR,Hu H,Wang GH,Li J,Chen JY,Wu P
Mol Plant 2009  2(4)  823-31
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
Carraro N., Forestan C., Canova S., Traas J., Varotto S.
Plant Physiol. 2006  142(1)  254-64
ZmPIN1a and ZmPIN1b encode two novel putative candidates for polar auxin transport and plant architecture determination of maize.
Ivan A Paponov, William D Teale, Trebar M., Blilou I., Palme K.
Trends Plant Sci. 2005  10(4)  170-7
The PIN auxin efflux facilitators: evolutionary and functional perspectives.
TextPresso Search Search textpresso for PIN9 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology negative gravitropism( GO:0009959 )
response to oxidative stress( GO:0006979 )
regulation of programmed cell death( GO:0043067 )
auxin mediated signaling pathway( GO:0009734 )
response to cold( GO:0009409 )
lateral root formation( GO:0010311 )
response to salt stress( GO:0009651 )
root development( GO:0048364 )
response to cytokinin stimulus( GO:0009735 )
response to auxin stimulus( GO:0009733 )
transmembrane transport( GO:0055085 )
integral to membrane( GO:0016021 )
response to cadmium ion( GO:0046686 )
plasma membrane( GO:0005886 )
response to hormone stimulus( GO:0009725 )
Trait Ontology nitrogen sensitivity( TO:0000011 )
plant growth hormone sensitivity( TO:0000401 )
auxin sensitivity( TO:0000163 )
cytokinin sensitivity( TO:0000167 )
root development trait( TO:0000656 )
salt tolerance( TO:0006001 )
cold tolerance( TO:0000303 )
plant height( TO:0000207 )
adventitious root number( TO:0001006 )
root length( TO:0000227 )
hydrogen peroxide content( TO:0000605 )
oxidative stress( TO:0002657 )
gravity response trait( TO:0002693 )
leaf rolling tolerance( TO:0002662 )
growth and development trait( TO:0000357 )
auxin content( TO:0002672 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Nov 23, 2023


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