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Basic Information
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CGSNL Gene Symbol
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PIN5B
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Gene Symbol Synonym
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PIN5C, OsPIN5c, OsPIN5b, PIN4
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CGSNL Gene Name
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PIN PROTEIN 5B
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Gene Name Synonym
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PIN PROTEIN 5C, PROBABLE AUXIN EFFLUX CARRIER COMPONENT 5C
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Protein Name
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PIN PROTEIN 5B
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Allele
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ospin5b, ospin5b-1, ospin5b-13
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Chromosome No.
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8
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Explanation
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BR000836. OsPIN5c in Zou et al. 2014. PIN4 in Zhang et al. 2020. GO:0060918: auxin transport.
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Trait Class
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Biochemical character
Reproductive organ - panicle
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100297
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MSU ID
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LOC_Os08g41720.1
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RAP ID
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Os08g0529000
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhang Y., Du H., Gui Y., Xu F., Liu J., Zhang J., Xu W.
J. Exp. Bot. 2020 71(9) 2740-2751
Moderate water stress in rice induces rhizosheath formation associated with abscisic acid and auxin responses.
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Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020 101(6) 1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
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Shuen-Fang Lo, Ming-Lung Cheng, Yue-Ie Caroline Hsing, Yi-Shih Chen, Kuo-Wei Lee, Ya-Fang Hong, Hsiao Y., An-Shan Hsiao, Pei-Jing Chen, Lai-In Wong, Nan-Chen Chen, Reuzeau C., Tuan-Hua David Ho, Su-May Yu
Plant Biotechnol. J. 2020
Rice Big Grain 1 promotes cell division to enhance organ development, stress tolerance and grain yield.
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Zeng Y., Wen J., Zhao W., Wang Q., Huang W.
Front Plant Sci 2019 10 1663
Rational Improvement of Rice Yield and cold tolerance by Editing the Three Genes <i>OsPIN5b</i>, <i>GS3</i>, and <i>OsMYB30</i> With the CRISPR-Cas9 System.
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He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018 8(1) 14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
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Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
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Zhao F.Y.a, Han M.M.a, Zhang S.Y.b, Ren J.a, Hu F.a, Wang X.a
Russian Journal of Plant Physiology 2014 61 608-618
MAPKs as a cross point in H2O2 and auxin signaling under combined cadmium and zinc stress in rice roots
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Zou Y., Liu X., Wang Q., Chen Y., Liu C., Qiu Y., Zhang W.
Biochim. Biophys. Acta 2014 1840(6) 1676-1685
OsRPK1, a novel leucine-rich repeat receptor-like kinase, negatively regulates polar auxin transport and root development in rice.
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ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010 277(14) 2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
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Miyashita Y., Takasugi T., Ito Y.
Plant Science 2010 178 424-428
Identification and expression analysis of PIN genes in rice
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Wang JR,Hu H,Wang GH,Li J,Chen JY,Wu P
Mol Plant 2009 2(4) 823-31
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
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Liu S., Wang J., Wang L., Wang X., Xue Y., WU P., Shou H.
Cell Res. 2009 19(9) 1110-9
Adventitious root formation in rice requires OsGNOM1 and is mediated by the OsPINs family.
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Carraro N., Forestan C., Canova S., Traas J., Varotto S.
Plant Physiol. 2006 142(1) 254-64
ZmPIN1a and ZmPIN1b encode two novel putative candidates for polar auxin transport and plant architecture determination of maize.
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Ivan A Paponov, William D Teale, Trebar M., Blilou I., Palme K.
Trends Plant Sci. 2005 10(4) 170-7
The PIN auxin efflux facilitators: evolutionary and functional perspectives.
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TextPresso Search
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Search textpresso for PIN5B
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to water( GO:0009415 )
auxin homeostasis( GO:0010252 )
endoplasmic reticulum( GO:0005783 )
transmembrane transport( GO:0055085 )
integral to membrane( GO:0016021 )
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Trait Ontology
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panicle length( TO:0000040 )
tiller number( TO:0000346 )
water stress trait( TO:0000237 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Jan 20, 2022
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