Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol PIN5C
Gene Symbol Synonym PIN5B, OsPIN5b, OsPIN5c
CGSNL Gene Name PIN PROTEIN 5C
Gene Name Synonym PIN PROTEIN 5B
Protein Name PIN PROTEIN 5C
Allele
Chromosome No. 9
Explanation BR000835. OsPIN5b in Zou et al. 2014, Zhang et al. 2020.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os09g32770.1
RAP ID Os09g0505400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang Y., Du H., Gui Y., Xu F., Liu J., Zhang J., Xu W.
J. Exp. Bot. 2020  71(9)  2740-2751
Moderate water stress in rice induces rhizosheath formation associated with abscisic acid and auxin responses.
Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019  31(6)  1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Zou Y., Liu X., Wang Q., Chen Y., Liu C., Qiu Y., Zhang W.
Biochim. Biophys. Acta 2014  1840(6)  1676-1685
OsRPK1, a novel leucine-rich repeat receptor-like kinase, negatively regulates polar auxin transport and root development in rice.
ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010  277(14)  2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
Miyashita Y., Takasugi T., Ito Y.
Plant Science 2010  178  424-428
Identification and expression analysis of PIN genes in rice
Wang JR,Hu H,Wang GH,Li J,Chen JY,Wu P
Mol Plant 2009  2(4)  823-31
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
TextPresso Search Search textpresso for PIN5C ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to water( GO:0009415 )
integral to membrane( GO:0016021 )
transmembrane transport( GO:0055085 )
Trait Ontology water stress trait( TO:0000237 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Aug 14, 2020

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