Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CLPC3
Gene Symbol Synonym ClpC3, OsCLPC3
CGSNL Gene Name CLASS I CLP ATPASE C3
Gene Name Synonym class I Clp ATPase C3
Protein Name CLASS I CLP ATPASE C3
Allele
Chromosome No. 11
Explanation
Trait Class Biochemical character
Vegetative organ - Culm
Reproductive organ - panicle
Reproductive organ - Pollination, fertilization, fertility
Character as QTL - Yield and productivity
Expression
Sequence/Locus
cDNA Accession No. AK100126
MSU ID LOC_Os11g16590.1
RAP ID Os11g0267400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yu H., Shahid M.Q., Li Q., Li Y., Li C., Lu Z., Wu J., Zhang Z., Liu X.
Rice (N Y) 2020  13(1)  32
Production Assessment and Genome Comparison Revealed High Yield Potential and Novel Specific Alleles Associated with Fertility and Yield in Neo-Tetraploid Rice.
Singh A., Singh U., Mittal D., Grover A.
BMC Genomics 2010  11  95.
Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes
TextPresso Search Search textpresso for CLPC3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein binding( GO:0005515 )
peptidase activity( GO:0008233 )
nucleoside-triphosphatase activity( GO:0017111 )
nuclease activity( GO:0004518 )
nucleotide-excision repair( GO:0006289 )
protein metabolic process( GO:0019538 )
ATP binding( GO:0005524 )
DNA binding( GO:0003677 )
Trait Ontology yield trait( TO:0000371 )
seed set percent( TO:0000455 )
pollen fertility( TO:0000421 )
panicle length( TO:0000040 )
plant height( TO:0000207 )
panicle number( TO:0000152 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 2, 2020

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