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Detail of Gene

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Basic Information
CGSNL Gene Symbol PIN10A
Gene Symbol Synonym PIN3A, OsPIN3a, OsPIN3t, OsPIN10a, OsPIN3
Gene Name Synonym PIN PROTEIN 3A
Protein Name PIN PROTEIN 10A
Chromosome No. 1
Explanation BR000832, AP003725, Q5VP70, auxin efflux carrier. gi:55297110. OsPIN3a in Zou et al. 2014 and Akiba et al. 2014, Maliket al. 2020. OsPIN3 in Deshpande et al. 2015, Lv et al. 2023. TO:0001041: root yield.
Trait Class Biochemical character
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK063976
MSU ID LOC_Os01g45550.1
RAP ID Os01g0643300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Ouyang Q., Zhang Y., Yang X., Yang C., Hou D., Liu H., Xu H.
Plants (Basel) 2023  12(15) 
Overexpression of <i>OsPIN9</i> Impairs Chilling Tolerance via Disturbing ROS Homeostasis in Rice.
Lv Y., Zhang X., Hu Y., Liu S., Yin Y., Wang X.
Front Plant Sci 2023  14  1162828
BOS1 is a basic helix-loop-helix transcription factor involved in regulating panicle development in rice.
Tripathi D.K., Rai P., Guerriero G., Sharma S., Corpas F.J., Singh V.P.
J. Exp. Bot. 2020   
Silicon induces adventitious root formation in rice (Oryza sativa L.) under arsenate stress with the involvement of nitric oxide and indole-3-acetic acid.
Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020  101(6)  1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
Pan J., Li Z., Wang Q., Yang L., Yao F., Liu W.
Plant Sci. 2020  290  110318
An S-domain receptor-like kinase, OsESG1, regulates early crown root development and drought resistance in rice.
Lee H.Y., Chen Z., Zhang C., Yoon G.M.
J. Exp. Bot. 2019  70(6)  1927-1940
Editing of the OsACS locus alters phosphate deficiency-induced adaptive responses in rice seedlings.
Wang T., Li C., Wu Z., Jia Y., Wang H., Sun S., Mao C., Wang X.
Front Plant Sci 2017  8  1121
Abscisic Acid Regulates Auxin Homeostasis in Rice Root Tips to Promote root hair Elongation.
Ma Y., Yang C., He Y., Tian Z., Li J.
J. Exp. Bot. 2017  68(17)  4885-4898
Rice OVATE family protein 6 regulates plant development and confers resistance to drought and cold stresses.
Xu Y.X., Xiao M.Z., Liu Y., Fu J.L., He Y., Jiang D.A.
Plant Mol. Biol. 2017   
The small auxin-up RNA OsSAUR45 affects auxin synthesis and transport in rice.
Deshpande G.M., Ramakrishna K., Chongloi G.L., Vijayraghavan U.
J. Exp. Bot. 2015  66(9)  2773-84
Functions for rice RFL in vegetative axillary meristem specification and outgrowth.
Akiba T., Hibara K.I., Kimura F., Tsuda K., Shibata K., Ishibashi M., Moriya C., Nakagawa K., Kurata N., Itoh J.I., Ito Y.
Plant Cell Physiol. 2014  55(1)  42-51
Organ fusion and defective shoot development in ONI3 mutants of rice.
Zou Y., Liu X., Wang Q., Chen Y., Liu C., Qiu Y., Zhang W.
Biochim. Biophys. Acta 2014  1840(6)  1676-1685
OsRPK1, a novel leucine-rich repeat receptor-like kinase, negatively regulates polar auxin transport and root development in rice.
Zhang Q., Li J., Zhang W., Yan S., Wang R., Zhao J., Li Y., Qi Z., Sun Z., Zhu Z.
Plant J. 2012  72(5)  805-16
The putative auxin efflux carrier OsPIN3t is involved in the drought stress response and drought tolerance.
Zhu Z.X., Liu Y., Liu S.J., Mao C.Z., Wu Y.R., Wu P.
Mol Plant 2011  5(1)  154-61
A Gain-of-Function Mutation in OsIAA11 Affects lateral root Development in Rice.
Miyashita Y., Takasugi T., Ito Y.
Plant Science 2010  178  424-428
Identification and expression analysis of PIN genes in rice
ChenJia Shen, YouHuang Bai, SuiKang Wang, SaiNa Zhang, YunRong Wu, Chen M., DeAn Jiang, YanHua Qi
FEBS J. 2010  277(14)  2954-69
Expression profile of PIN, AUX/LAX and PGP auxin transporter gene families in Sorghum bicolor under phytohormone and abiotic stress.
Wang JR,Hu H,Wang GH,Li J,Chen JY,Wu P
Mol Plant 2009  2(4)  823-31
Expression of PIN genes in rice (Oryza sativa L.): tissue specificity and regulation by hormones.
Carraro N., Forestan C., Canova S., Traas J., Varotto S.
Plant Physiol. 2006  142(1)  254-64
ZmPIN1a and ZmPIN1b encode two novel putative candidates for polar auxin transport and plant architecture determination of maize.
Ivan A Paponov, William D Teale, Trebar M., Blilou I., Palme K.
Trends Plant Sci. 2005  10(4)  170-7
The PIN auxin efflux facilitators: evolutionary and functional perspectives.
Xu M, Zhu L, Shou H, Wu P.
Plant Cell Physiol. 2005  46(10)  1674-81
A PIN1 family gene, OsPIN1, involved in auxin-dependent adventitious root emergence and tillering in rice.
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DB Reference
Gramene ID -
Gene Ontology response to cold( GO:0009409 )
adventitious root development( GO:0048830 )
response to arsenic( GO:0046685 )
auxin mediated signaling pathway( GO:0009734 )
integral to membrane( GO:0016021 )
transmembrane transport( GO:0055085 )
response to abscisic acid stimulus( GO:0009737 )
response to starvation( GO:0042594 )
Trait Ontology abscisic acid sensitivity( TO:0000615 )
silicon sensitivity( TO:0000031 )
root number( TO:0000084 )
adventitious root number( TO:0001006 )
root fresh weight( TO:0000578 )
cold tolerance( TO:0000303 )
Plant Ontology epidermal cell( PO:0004013 )
Related Strains
Phenotype images
Last updated
Nov 23, 2023