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Basic Information
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CGSNL Gene Symbol
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BC7
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Gene Symbol Synonym
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OsCesA4, OsCESA4, CESA4, OS_CESA04, BC11, bc7t, Bc7(t), bc-7, OsCesA 4, CesA4, FC17/CESA4, FC17, OsFC17
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CGSNL Gene Name
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BRITTLE CULM 7
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Gene Name Synonym
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Cellulose synthase A catalytic subunit 4 [UDP-forming], Cellulose synthase A catalytic subunit 4, brittle culm 7, brittle culm11, fragile culm 17
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Protein Name
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CELLULOSE SYNTHASE A4
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Allele
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bc7, bc11, oscesa, cesa4, fc17
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Chromosome No.
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1
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Explanation
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EC=2.4.1.12 A2WV32(indica). Q5JN63(japonca). a secondary cell wall (SCW)-related gene. GO:0036377: arbuscular mycorrhizal association. GO:1901698: response to nitrogen compound. TO:0000993: cellulose content.
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Trait Class
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Biochemical character
Vegetative organ - Culm
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK100475
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MSU ID
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LOC_Os01g54620.1
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RAP ID
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Os01g0750300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhou Y., Gao Y.H., Zhang B.C., Yang H.L., Tian Y.B., Huang Y.H., Yin C.C., Tao J.J., Wei W., Zhang W.K., Chen S.Y., Zhou Y.H., Zhang J.S.
Plant Cell 2024
CELLULOSE SYNTHASE-LIKE C proteins modulate cell wall establishment during ethylene-mediated root growth inhibition in rice.
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Cao S., Wang Y., Gao Y., Xu R., Ma J., Xu Z., Shang-Guan K., Zhang B., Zhou Y.
Mol Plant 2023 16(6) 999-1015
The RLCK-VND6 module coordinates secondary cell wall formation and adaptive growth in rice.
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Shen Y., Yang G., Miao X., Shi Z.
Rice (N Y) 2023 16(1) 30
OsmiR159 Modulate BPH Resistance Through Regulating G-Protein γ Subunit GS3 Gene in Rice.
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Peng S., Liu Y., Xu Y., Zhao J., Gao P., Liu Q., Yan S., Xiao Y., Zuo S.M., Kang H.
Int J Mol Sci 2023 24(14)
Genome-Wide Association Study Identifies a Plant-Height-Associated Gene <i>OsPG3</i> in a Population of Commercial Rice Varieties.
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Wang F., Cheng Z., Wang J., Zhang F., Zhang B., Luo S., Lei C., Pan T., Wang Y., Zhu Y., Wang M., Chen W., Lin Q., Zhu S., Zhou Y., Zhao Z., Wang J., Guo X., Zhang X., Jiang L., Bao Y., Ren Y., Wan J.
Plant Physiol. 2022 189(2) 567-584
Rice STOMATAL CYTOKINESIS DEFECTIVE2 regulates cell expansion by affecting vesicular trafficking in rice.
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Jiang H., Ren Y., Guo J., Yang H., Zhu X., Li W., Tao L., Zhan Y., Wang Q., Wu Y., Liu B., Ye Y.
Biotechnol Biofuels Bioprod 2022 15(1) 111
CEF3 is involved in membrane trafficking and essential for secondary cell wall biosynthesis and its mutation enhanced biomass enzymatic saccharification in rice.
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Ye Y., Wang S., Wu K., Ren Y., Jiang H., Chen J., Tao L., Fu X., Liu B., Wu Y.
Rice (N Y) 2021 14(1) 19
A Semi-Dominant Mutation in OsCESA9 Improves salt tolerance and Favors Field Straw Decay Traits by Altering Cell Wall Properties in Rice.
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Wu L., Zhang M., Zhang R., Yu H., Wang H., Li J., Wang Y., Hu Z., Wang Y., Luo Z., Li L., Wang L., Peng L., Xia T.
Biotechnol Biofuels 2021 14(1) 245
Down-regulation of OsMYB103L distinctively alters beta-1,4-glucan polymerization and cellulose microfibers assembly for enhanced biomass enzymatic saccharification in rice.
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Wang D., Xu T., Yin Z., Wu W., Geng H., Li L., Yang M., Cai H., Lian X.
Front Plant Sci 2020 11 369
Overexpression of OsMYB305 in Rice Enhances the Nitrogen Uptake Under Low-Nitrogen Condition.
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Liu S., Tang Y., Ruan N., Dang Z., Huang Y., Miao W., Xu Z., Li F.
Rice (N Y) 2020 13(1) 41
The Rice bz1 Locus Is Required for Glycosylation of Arabinogalactan Proteins and Galactolipid and Plays a Role in both Mechanical Strength and Leaf Color.
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Xu Y., Hu D., Hou X., Shen J., Liu J., Cen X., Fu J., Li X., Hu H., Xiong L.
New Phytol. 2020 227(2) 498-512
OsTMF attenuates cold tolerance by affecting cell wall properties in rice.
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Zhang R., Hu H., Wang Y., Hu Z., Ren S., Li J., He B., Wang Y., Xia T., Chen P., Xie G., Peng L.
J. Exp. Bot. 2020
A novel rice fragile culm 24 mutant encodes a UDP-glucose epimerase that affects cell wall property and photosynthesis.
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Wu T., Peng C., Li B., Wu W., Kong L., Li F., Chu Z., Liu F., Ding X.
Rice (N Y) 2019 12(1) 90
OsPGIP1-Mediated Resistance to Bacterial Leaf Streak in Rice is Beyond Responsive to the Polygalacturonase of Xanthomonas oryzae pv. oryzicola.
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Fan C., Wang G., Wang Y., Zhang R., Wang Y., Feng S., Luo K., Peng L.
Int J Mol Sci 2019 20(20)
sucrose synthase Enhances Hull Size and grain weight by Regulating Cell Division and Starch Accumulation in Transgenic Rice.
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Wang S., Yang H., Mei J., Liu X., Wen Z., Zhang L., Xu Z., Zhang B., Zhou Y.
Plant Physiol. 2019 181(2) 669-682
Rice Homeobox Protein KNAT7 Integrates the Pathways Regulating Cell Expansion and Wall Stiffness.
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Zhao K., Lin F., Romero-Gamboa SP., Saha P., Goh H.J., An G., Jung K.H., Hazen S.P., Bartley L.E.
Front Plant Sci 2019 10 1275
Rice Genome-Scale Network Integration Reveals Transcriptional Regulators of Grass Cell Wall Synthesis.
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Li F., Liu S., Xu H., Xu Q.
Biotechnol Biofuels 2018 11 298
A novel FC17/CESA4 mutation causes increased biomass saccharification and lodging resistance by remodeling cell wall in rice.
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Ye Y., Wu K., Chen J., Liu Q., Wu Y., Liu B., Fu X.
Rice (N Y) 2018 11(1) 36
OsSND2, a NAC family transcription factor, is involved in secondary cell wall biosynthesis through regulating MYBs expression in rice.
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Schneider R., Tang L., Lampugnani E.R., Barkwill S., Lathe R., Zhang Y., McFarlane H.E., Pesquet E., Niittyla T., Mansfield S.D., Zhou Y., Persson S.
Plant Cell 2017 29(10) 2433-2449
Two Complementary Mechanisms Underpin Cell Wall Patterning during Xylem Vessel Development.
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Hu K., Cao J., Zhang J., Xia F., Ke Y., Zhang H., Xie W., Liu H., Cui Y., Cao Y., Sun X., Xiao J., Li X., Zhang Q., Wang S.
Nat Plants 2017 3 17009
Improvement of multiple agronomic traits by a disease resistance gene via cell wall reinforcement.
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Zhang W., Wu L., Ding Y., Yao X., Wu X., Weng F., Li G., Liu Z., Tang S., Ding C., Wang S.
J. Plant Res. 2017
Nitrogen fertilizer application affects lodging resistance by altering secondary cell wall synthesis in japonica rice (Oryza sativa).
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Li F., Xie G., Huang J., Zhang R., Li Y., Zhang M., Wang Y., Li A., Li X., Xia T., Qu C., Hu F., Ragauskas A.J., Peng L.
Plant Biotechnol. J. 2017
OsCESA9 conserved-site mutation leads to largely enhanced plant lodging resistance and biomass enzymatic saccharification by reducing cellulose DP and crystallinity in rice.
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Wu L., Zhang W., Ding Y., Zhang J., Cambula E.D., Weng F., Liu Z., Ding C., Tang S., Chen L., Wang S., Li G.
Front Plant Sci 2017 8 881
Shading Contributes to the Reduction of Stem Mechanical Strength by Decreasing Cell Wall Synthesis in Japonica Rice (Oryza sativa L.).
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Huang P., Yoshida H., Yano K., Kinoshita S., Kawai K., Koketsu E., Hattori M., Takehara S., Huang J., Hirano K., Ordonio R.L., Matsuoka M., Ueguchi-Tanaka M.
J Integr Plant Biol 2017
OsIDD2, a zinc finger and INDETERMINATE DOMAIN protein, regulates secondary cell wall formation.
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Fan C., Feng S., Huang J., Wang Y., Wu L., Li X., Wang L., Tu Y., Xia T., Li J., Cai X., Peng L.
Biotechnol Biofuels 2017 10 221
AtCesA8-driven OsSUS3 expression leads to largely enhanced biomass saccharification and lodging resistance by distinctively altering lignocellulose features in rice.
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Shi L., Wei X.J., Adedze Y.M., Sheng Z.H., Tang S.Q., Hu P.S., Wang J.L.
Genet. Mol. Res. 2016 15(3)
Characterization and gene cloning of the rice (Oryza sativa L.) dwarf and narrow-leaf mutant DNL3.
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Ma J., Cheng Z., Chen J., Shen J., Zhang B., Ren Y., Ding Y., Zhou Y., Zhang H., Zhou K., Wang J.L., Lei C., Zhang X., Guo X., Gao H., Bao Y., Wan J.M.
PLoS ONE 2016 11(4) e0153119
Phosphatidylserine Synthase Controls Cell Elongation Especially in the Uppermost Internode in Rice by Regulation of Exocytosis.
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Noda S., Koshiba T., Hattori T., Yamaguchi M., Suzuki S., Umezawa T.
Planta 2015 242(3) 589-600
The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.
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Gutjahr C., Sawers R.J., Marti G., Andrés-Hernández L., Yang S.Y., Casieri L., Angliker H., Oakeley E.J., Wolfender J.L., Abreu-Goodger C., Paszkowski U.
Proc. Natl. Acad. Sci. U.S.A. 2015 112(21) 6754-9
Transcriptome diversity among rice root types during asymbiosis and interaction with arbuscular mycorrhizal fungi.
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Ye Y., Liu B., Zhao M., Wu K., Cheng W., Chen X., Liu Q., Liu Z., Fu X., Wu Y.
Plant Mol. Biol. 2015 89(4-5) 385-401
CEF1/OsMYB103L is involved in GA-mediated regulation of secondary wall biosynthesis in rice.
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Liu G., Zhang K., Ai J., Su Y., Deng X., Hong Y., Wang X.
J. Exp. Bot. 2015
Patatin-related phospholipase A, pPLAIIIalpha, modulates the longitudinal growth of vegetative tissues and seeds in rice.
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Guevara D.R., El-Kereamy A., Yaish M.W., Mei-Bi Y., Rothstein S.J.
PLoS ONE 2014 9(5) e96158
Functional characterization of the rice UDP-glucose 4-epimerase 1, OsUGE1: a potential role in cell wall carbohydrate partitioning during limiting nitrogen conditions.
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Yang C., Li D., Liu X., Ji C., Hao L., Zhao X., Li X., Chen C., Cheng Z., Zhu L.
BMC Plant Biol. 2014 14 158
OsMYB103L, an R2R3-MYB transcription factor, influences leaf rolling and mechanical strength in rice (Oryza sativa L.).
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Fanata W.I., Lee K.H., Son B.H., Yoo J.Y., Harmoko R., Ko K.S., Ramasamy N.K., Kim K.H., Oh D.B., Jung H.S., Kim J.Y., Lee S.Y., Lee K.O.
Plant J. 2013 73(6) 966-79
N-glycan maturation is crucial for cytokinin-mediated development and cellulose synthesis in Oryza sativa.
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Wu B., Zhang B., Dai Y., Zhang L., Shang-Guan K., Peng Y., Zhou Y., Zhu Z.
Plant Physiol. 2012 159(4) 1440-52
Brittle culm15 encodes a membrane-associated chitinase-like protein required for cellulose biosynthesis in rice.
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Madana M R Ambavaram, Krishnan A., Kurniawan R Trijatmiko, Pereira A.
Plant Physiol. 2011 155(2) 916-31
Coordinated activation of cellulose and repression of lignin biosynthesis pathways in rice.
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Wang L., Guo K., Li Y., Tu Y., Hu H., Wang B., Cui X., Peng L.
BMC Plant Biol. 2010 10 282
Expression profiling and integrative analysis of the CESA/CSL superfamily in rice.
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Zhang B,Deng L,Qian Q,Xiong G,Zeng D,Li R,Guo L,Li J,Zhou Y
Plant Mol. Biol. 2009 71(4-5) 509-24
A missense mutation in the transmembrane domain of CESA4 affects protein abundance in the plasma membrane and results in abnormal cell wall biosynthesis in rice.
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Shobbar ZS,Oane R,Gamuyao R,De Palma J,Malboobi MA,Karimzadeh G,Javaran MJ,Bennett J
New Phytol. 2008 178 68-79
Abscisic acid regulates gene expression in cortical fiber cells and silica cells of rice shoots.
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Yan C,Yan S,Zeng X,Zhang Z,Gu M
J Genet Genomics 2007 34 1019-27
Fine mapping and isolation of Bc7(t), allelic to OsCesA4.
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Tanaka K, Murata K, Yamazaki M, Onosato K, Miyao A, Hirochika H.
Plant Physiol. 2003 133(1) 73-83
Three distinct rice cellulose synthase catalytic subunit genes required for cellulose synthesis in the secondary wall.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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defense response to insect( GO:0002213 )
plant-type cell wall organization or biogenesis( GO:0071669 )
response to ethylene stimulus( GO:0009723 )
secondary cell wall( GO:0009531 )
response to cold( GO:0009409 )
symbiosis, encompassing mutualism through parasitism( GO:0044403 )
protein binding( GO:0005515 )
response to symbiotic fungus( GO:0009610 )
plasma membrane( GO:0005886 )
cell wall organization( GO:0007047 )
zinc ion binding( GO:0008270 )
membrane( GO:0016020 )
integral to membrane( GO:0016021 )
cellulose synthase (UDP-forming) activity( GO:0016760 )
cellulose biosynthetic process( GO:0030244 )
secondary cell wall biogenesis( GO:0009834 )
response to light intensity( GO:0009642 )
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Trait Ontology
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nitrogen sensitivity( TO:0000011 )
stem strength( TO:0000051 )
light intensity sensitivity( TO:0000460 )
cold tolerance( TO:0000303 )
brown planthopper resistance( TO:0000424 )
ethylene sensitivity( TO:0000173 )
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Plant Ontology
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root system( PO:0025025 )
stem( PO:0009047 )
root tip( PO:0000025 )
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Related Strains
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Phenotype images
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Last updated
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Feb 18, 2025
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Update info.