Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CCH
Gene Symbol Synonym OsATX1, OsCCH, OsaCCH, ATX1, OsHMP14, HMP14
CGSNL Gene Name COPPER CHAPERONE HOMOLOG
Gene Name Synonym Anti-oxidant 1, copper chaperone homolog CCH, Heavy metal-associated protein 14
Protein Name COPPER CHAPERONE HOMOLOG
Allele
Chromosome No. 2
Explanation AF198626. down-regulated after fertilization (Abiko et al. 2013).
Trait Class Biochemical character
Reproductive organ - Pollination, fertilization, fertility
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK058520
MSU ID LOC_Os02g32814.1
RAP ID Os02g0530100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Li J., Zhang M., Sun J., Mao X., Wang J., Liu H., Zheng H., Li X., Zhao H., Zou D.
Front Genet 2020  11  477
Heavy Metal Stress-Associated Proteins in Rice and <i>Arabidopsis</i>: Genome-Wide Identification, Phylogenetics, Duplication, and Expression Profiles Analysis.
Whankaew S., Kaewmanee S., Ruttajorn K., Phongdara A.
Physiol Mol Biol Plants 2020  26(6)  1237-1247
Indel marker analysis of putative stress-related genes reveals genetic diversity and differentiation of rice landraces in peninsular Thailand.
Andrés-Bordería A., Andrés F., Garcia-Molina A., Perea-García A., Domingo C., Puig S., Peñarrubia L.
Plant Mol. Biol. 2017   
Copper and ectopic expression of the Arabidopsis transport protein COPT1 alter iron homeostasis in rice (Oryza sativa L.).
de Abreu-Neto JB., Turchetto-Zolet AC., de Oliveira LF., Zanettini M.H., Margis-Pinheiro M.
FEBS J. 2013  280(7)  1604-16
Heavy metal-associated isoprenylated plant protein (HIPP): characterization of a family of proteins exclusive to plants.
Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013  64(7)  1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
Himelblau,E., Mira,H., Lin,S.J., Culotta,V.C., Penarrubia,L. and Amasino,R.M.
Plant Physiol. 1998  117(4)  1227-1234
Identification of a functional homolog of the yeast copper homeostasis gene ATX1 from Arabidopsis.
DB Reference
Gramene ID GR:0101323
Ontologies
Gene Ontology response to lead ion( GO:0010288 )
response to zinc ion( GO:0010043 )
response to cadmium ion( GO:0046686 )
nucleus( GO:0005634 )
metal ion binding( GO:0046872 )
metal ion transport( GO:0030001 )
copper ion binding( GO:0005507 )
iron ion transport( GO:0006826 )
response to copper ion( GO:0046688 )
fertilization( GO:0009566 )
Trait Ontology copper sensitivity( TO:0000021 )
zinc sensitivity( TO:0000351 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Nov 30, 2021


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