Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
|---|---|
| CGSNL Gene Symbol | ATG8 |
| Gene Symbol Synonym | Atg8, OsAtg8, APG8, OsATG8a, Atg8a |
| CGSNL Gene Name | AUTOPHAGY ASSOCIATED GENE 8 |
| Gene Name Synonym | autophagy 8, autophagy 8a, AUTOPHAGY ASSOCIATED GENE 8A, OsAuTophaGy8a, AUTOPHAGY RELATED8a |
| Protein Name | |
| Allele | |
| Chromosome No. | 7 |
| Explanation | Q69RC4, Q2XPP5, DQ269983, ABB77258, PO:0020104; leaf sheath ; PO:0009049; inflorescence ; PO:0009005; root ; PO:0009025; leaf. LOC_Os07g32800. Atg8a in Chung et al. 2009. |
| Trait Class |
Biochemical character
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| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK059939
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| MSU ID |
LOC_Os07g32800.1
LOC_Os07g32800.2 |
| RAP ID |
Os07g0512200 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Izumi M., Hidema J., Wada S., Kondo E., Kurusu T., Kuchitsu K., Makino A., Ishida H.
Plant Physiol. 2015 167(4) 1307-20 Establishment of Monitoring Methods for Autophagy in Rice Reveals Autophagic Recycling of Chloroplasts and Root Plastids during Energy Limitation.
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Xia K., Liu T., Ouyang J., Wang R., Fan T., Zhang M.
DNA Res. 2011 18(5) 363-77 Genome-wide identification, classification, and expression analysis of autophagy-associated gene homologues in rice (Oryza sativa L.).
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Chung T., Suttangkakul A., Richard D Vierstra
Plant Physiol. 2009 149(1) 220-34 The ATG autophagic conjugation system in maize: ATG transcripts and abundance of the ATG8-lipid adduct are regulated by development and nutrient availability.
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Su,W., Ma,H., Liu,C., Wu,J. and Yang,J.
Mol. Biol. Rep. 2006 33(4) 273-278 Identification and characterization of two rice autophagy associated genes, OsAtg8 and OsAtg4.
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| TextPresso Search | Search textpresso for ATG8 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | GR:0101171 |
| Ontologies | |
| Gene Ontology |
autophagic vacuole membrane( GO:0000421 )
protein binding( GO:0005515 ) cytoplasm( GO:0005737 ) mitochondrion( GO:0005739 ) vacuolar lumen( GO:0005775 ) autophagic vacuole( GO:0005776 ) microtubule( GO:0005874 ) autophagy( GO:0006914 ) protein transport( GO:0015031 ) Atg8 ligase activity( GO:0019776 ) APG8 activating enzyme activity( GO:0019779 ) APG8-specific protease activity( GO:0019786 ) CVT vesicle membrane( GO:0033110 ) |
| Trait Ontology | - |
| Plant Ontology |
root( PO:0009005 )
vascular leaf( PO:0009025 ) inflorescence( PO:0009049 ) leaf sheath( PO:0020104 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jun 1, 2015 | |
