Gene - Detail

Detail of Gene

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Basic Information
Gene Symbol Synonym GBSS2, OsGBSSII, OsGBSS2
Gene Name Synonym Granule-bound starch synthase Ib, Granule-bound starch synthase II
Chromosome No. 7
Explanation AY069940. FJ811002-FJ811042 (Oryza glaberrima, Oryza barthii, Oryza nivara). DQ901890-DQ901918 (wild rice species). EF069642-EF069713 (O.sativa and wild rice species). GQ150865.
Trait Class Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Storage substances
Biochemical character
cDNA Accession No. AK067654
MSU ID LOC_Os07g22930.2
RAP ID Os07g0412100
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Teng Z., Zheng Q., Liu B., Meng S., Zhang J., Ye N.
Int J Mol Sci 2022  23(14) 
Moderate Soil Drying-Induced Alternative Splicing Provides a Potential Novel Approach for the Regulation of Grain Filling in Rice Inferior Spikelets.
Zhang H., Jang S.G., Lar S.M., Lee A.R., Cao F.Y., Seo J., Kwon S.W.
Plants (Basel) 2021  10(6) 
Genome-Wide Identification and Genetic Variations of the starch synthase Gene Family in Rice.
Park J.R., Kim E.G., Jang Y.H., Kim K.M.
BMC Plant Biol. 2021  21(1)  263
Screening and identification of genes affecting grain quality and spikelet fertility during high-temperature treatment in grain filling stage of rice.
Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(42)  26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
Hu L., Tu B., Yang W., Yuan H., Li J., Guo L., Zheng L., Chen W., Zhu X., Wang Y., Qin P., Ma B., Li S.
Plant Physiol. 2020  183(3)  1073-1087
Mitochondria-Associated pyruvate kinase Complexes Regulate Grain Filling in Rice.
Wang W., Wei X., Jiao G., Chen W., Wu Y., Sheng Z., Hu S., Xie L., Wang J., Tang S., Hu P.
J Integr Plant Biol 2019   
GBSS-binding protein, encoding a CBM48 domain-containing protein, affects rice quality and yield.
Cui D., Tang C., Li J., A X., Yu T., Ma X., Zhang E., Wang Y., Cao G., Xu F., Dai L., Han L., Koh H.J.
PLoS ONE 2017  12(4)  e0175731
Genetic structure and isolation by altitude in rice landraces of Yunnan, China revealed by nucleotide and microsatellite marker polymorphisms.
Wada H., Masumoto-Kubo C., Tsutsumi K., Nonami H., Tanaka F., Okada H., Erra-Balsells R., Hiraoka K., Nakashima T., Hakata M., Morita S.
PLoS ONE 2017  12(7)  e0181272
Turgor-responsive starch phosphorylation in Oryza sativa stems: A primary event of starch degradation associated with grain-filling ability.
Su J., Hu C., Yan X., Jin Y., Chen Z., Guan Q., Wang Y., Zhong D., Jansson C., Wang F., Schnürer A., Sun C.
Nature 2015  523(7562)  602-6
Expression of barley SUSIBA2 transcription factor yields high-starch low-methane rice.
Morita R., Sugino M., Hatanaka T., Misoo S., Fukayama H.
Plant Physiol. 2015  167(4)  1321-31
CO2-Responsive CONSTANS, CONSTANS-Like, and Time of Chlorophyll a/b Binding Protein Expression1 Protein Is a Positive Regulator of Starch Synthesis in Vegetative Organs of Rice.
Park S.H., Chung P.J., Juntawong P., Bailey-Serres J., Kim Y.S., Jung H., Bang S.W., Kim Y.K., Do Choi Y., Kim J.K.
Plant Physiol. 2012  159(3)  1111-24
Posttranscriptional Control of Photosynthetic mRNA Decay under Stress Conditions Requires 3' and 5' Untranslated Regions and Correlates with Differential Polysome Association in Rice.
Li,Z.M., Zheng,X.M. and Ge,S.
Theor. Appl. Genet. 2011  123(1)  21-31
Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences
Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011  122(1)  63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009  106(51)  21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
Zhu,Q., Zheng,X., Luo,J., Gaut,B.S. and Ge,S.
Mol. Biol. Evol. 2007  24(3)  875-888
Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice
Zhang,L.B. and Ge,S.
Mol. Biol. Evol. 2007  24(3)  769-783
Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives
Hirose T, Terao T.
Planta. 2004  220(1)  9-16
A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.).
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DB Reference
Gramene ID -
Gene Ontology response to desiccation( GO:0009269 )
response to heat( GO:0009408 )
inflorescence development( GO:0010229 )
starch biosynthetic process( GO:0019252 )
glycogen (starch) synthase activity( GO:0004373 )
starch metabolic process( GO:0005982 )
starch synthase activity( GO:0009011 )
Trait Ontology inflorescence development trait( TO:0000621 )
heat tolerance( TO:0000259 )
drought related trait( TO:0000394 )
Plant Ontology inflorescence development stage( PO:0001083 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
leaf( PO:0025034 )
Related Strains
Phenotype images
Last updated
Jul 18, 2023