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Basic Information
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CGSNL Gene Symbol
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GBSSII
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Gene Symbol Synonym
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GBSS2, OsGBSSII, OsGBSS2
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CGSNL Gene Name
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GRANULE BOUND STARCH SYNTHASE II
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Gene Name Synonym
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Granule-bound starch synthase Ib, Granule-bound starch synthase II, granule-bound starch synthase 2
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Protein Name
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GRANULE BOUND STARCH SYNTHASE II
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Allele
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Chromosome No.
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7
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Explanation
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AY069940. FJ811002-FJ811042 (Oryza glaberrima, Oryza barthii, Oryza nivara). DQ901890-DQ901918 (wild rice species). EF069642-EF069713 (O.sativa and wild rice species). GQ150865.
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Trait Class
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Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK067654
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MSU ID
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LOC_Os07g22930.2
LOC_Os07g22930.3
LOC_Os07g22930.4
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RAP ID
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Os07g0412100
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Dong N., Jiao G., Cao R., Li S., Zhao S., Duan Y., Ma L., Li X., Lu F., Wang H., Wang S., Shao G., Sheng Z., Hu S., Tang S., Wei X., Hu P.
Plant Commun 2024 5(7) 100893
OsLESV and OsESV1 promote transitory and storage starch biosynthesis to determine rice grain quality and yield.
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Jang Y.H., Park J.R., Kim E.G., Jan R., Asif S., Farooq M., Zhao D.D., Kim K.M.
Mol. Breed. 2023 43(5) 39
Efficient identification of palatability-related genes using QTL mapping in rice breeding.
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Teng Z., Zheng Q., Liu B., Meng S., Zhang J., Ye N.
Int J Mol Sci 2022 23(14)
Moderate Soil Drying-Induced Alternative Splicing Provides a Potential Novel Approach for the Regulation of Grain Filling in Rice Inferior Spikelets.
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Maung T.Z., Chu S.H., Park Y.J.
Foods 2021 10(10)
Functional Haplotypes and Evolutionary Insight into the Granule-Bound Starch Synthase II (<i>GBSSII</i>) Gene in Korean Rice Accessions (KRICE_CORE).
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Park J.R., Kim E.G., Jang Y.H., Kim K.M.
BMC Plant Biol. 2021 21(1) 263
Screening and identification of genes affecting grain quality and spikelet fertility during high-temperature treatment in grain filling stage of rice.
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Zhang H., Jang S.G., Lar S.M., Lee A.R., Cao F.Y., Seo J., Kwon S.W.
Plants (Basel) 2021 10(6)
Genome-Wide Identification and Genetic Variations of the starch synthase Gene Family in Rice.
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Hu L., Tu B., Yang W., Yuan H., Li J., Guo L., Zheng L., Chen W., Zhu X., Wang Y., Qin P., Ma B., Li S.
Plant Physiol. 2020 183(3) 1073-1087
Mitochondria-Associated pyruvate kinase Complexes Regulate Grain Filling in Rice.
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Baysal C., He W., Drapal M., Villorbina G., Medina V., Capell T., Khush G.S., Zhu C., Fraser P.D., Christou P.
Proc. Natl. Acad. Sci. U.S.A. 2020 117(42) 26503-26512
Inactivation of rice starch branching enzyme IIb triggers broad and unexpected changes in metabolism by transcriptional reprogramming.
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Wang W., Wei X., Jiao G., Chen W., Wu Y., Sheng Z., Hu S., Xie L., Wang J., Tang S., Hu P.
J Integr Plant Biol 2019
GBSS-binding protein, encoding a CBM48 domain-containing protein, affects rice quality and yield.
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Wada H., Masumoto-Kubo C., Tsutsumi K., Nonami H., Tanaka F., Okada H., Erra-Balsells R., Hiraoka K., Nakashima T., Hakata M., Morita S.
PLoS ONE 2017 12(7) e0181272
Turgor-responsive starch phosphorylation in Oryza sativa stems: A primary event of starch degradation associated with grain-filling ability.
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Cui D., Tang C., Li J., A X., Yu T., Ma X., Zhang E., Wang Y., Cao G., Xu F., Dai L., Han L., Koh H.J.
PLoS ONE 2017 12(4) e0175731
Genetic structure and isolation by altitude in rice landraces of Yunnan, China revealed by nucleotide and microsatellite marker polymorphisms.
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Su J., Hu C., Yan X., Jin Y., Chen Z., Guan Q., Wang Y., Zhong D., Jansson C., Wang F., Schnürer A., Sun C.
Nature 2015 523(7562) 602-6
Expression of barley SUSIBA2 transcription factor yields high-starch low-methane rice.
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Morita R., Sugino M., Hatanaka T., Misoo S., Fukayama H.
Plant Physiol. 2015 167(4) 1321-31
CO2-Responsive CONSTANS, CONSTANS-Like, and Time of Chlorophyll a/b Binding Protein Expression1 Protein Is a Positive Regulator of Starch Synthesis in Vegetative Organs of Rice.
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Park S.H., Chung P.J., Juntawong P., Bailey-Serres J., Kim Y.S., Jung H., Bang S.W., Kim Y.K., Do Choi Y., Kim J.K.
Plant Physiol. 2012 159(3) 1111-24
Posttranscriptional Control of Photosynthetic mRNA Decay under Stress Conditions Requires 3' and 5' Untranslated Regions and Correlates with Differential Polysome Association in Rice.
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Li,Z.M., Zheng,X.M. and Ge,S.
Theor. Appl. Genet. 2011 123(1) 21-31
Genetic diversity and domestication history of African rice (Oryza glaberrima) as inferred from multiple gene sequences
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Yan CJ,Tian ZX,Fang YW,Yang YC,Li J,Zeng SY,Gu SL,Xu CW,Tang SZ,Gu MH
Theor. Appl. Genet. 2011 122(1) 63-76
Genetic analysis of starch paste viscosity parameters in glutinous rice (Oryza sativa L.).
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Tian,Z., Qian,Q., Liu,Q., Yan,M., Liu,X., Yan,C., Liu,G., Gao,Z., Tang,S., Zeng,D., Wang,Y., Yu,J., Gu,M. and Li,J.
Proc. Natl. Acad. Sci. U.S.A. 2009 106(51) 21760-5
Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities
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Zhang,L.B. and Ge,S.
Mol. Biol. Evol. 2007 24(3) 769-783
Multilocus analysis of nucleotide variation and speciation in Oryza officinalis and its close relatives
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Zhu,Q., Zheng,X., Luo,J., Gaut,B.S. and Ge,S.
Mol. Biol. Evol. 2007 24(3) 875-888
Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice
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Hirose T, Terao T.
Planta. 2004 220(1) 9-16
A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.).
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to desiccation( GO:0009269 )
response to heat( GO:0009408 )
inflorescence development( GO:0010229 )
starch biosynthetic process( GO:0019252 )
glycogen (starch) synthase activity( GO:0004373 )
starch metabolic process( GO:0005982 )
starch synthase activity( GO:0009011 )
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Trait Ontology
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inflorescence development trait( TO:0000621 )
heat tolerance( TO:0000259 )
drought related trait( TO:0000394 )
starch content( TO:0000696 )
amylose content( TO:0000196 )
chalky endosperm( TO:0000266 )
1000-seed weight( TO:0000382 )
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Plant Ontology
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inflorescence development stage( PO:0001083 )
plant ovary( PO:0009072 )
plant embryo( PO:0009009 )
leaf( PO:0025034 )
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Related Strains
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Phenotype images
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Last updated
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Mar 17, 2025
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