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Basic Information
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CGSNL Gene Symbol
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MET1B
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Gene Symbol Synonym
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OsMET1b, OsMET1-2, MET1b, MET1
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CGSNL Gene Name
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METHYLTRANSFERASE 1B
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Gene Name Synonym
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DNA methyltransferase 1-2
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Protein Name
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DNA METHYLTRANSFERASE 1B
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Allele
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met1b
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Chromosome No.
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7
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Explanation
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Alternative splicing. DNA MTase. BK001405, AP003855. B1Q3J6. a major CG methylase. MET1 in in Li et al. 2017. up-regulated after fertilization (Abiko et al. 2013). a target gene of OsMIR162a.
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Trait Class
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Biochemical character
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK111461
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MSU ID
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LOC_Os07g08500.1
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RAP ID
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Os07g0182900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022 20(2) 310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
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Li J., Li N., Zhu L., Zhang Z., Li X., Wang J., Xun H., Zhao J., Wang X., Wang T., Wang H., Liu B., Li Y., Gong L.
G3 (Bethesda) 2021 11(4)
Mutation of a major CG methylase alters genome-wide lncRNA expression in rice.
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Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018 11(2) 300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
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Li S., Xia Q., Wang F., Yu X., Ma J., Kou H., Lin X., Gao X., Liu B.
Front Plant Sci 2017 8 363
Laser Irradiation-Induced DNA Methylation Changes Are Heritable and Accompanied with Transpositional Activation of mPing in Rice.
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Hu L., Li N., Xu C., Zhong S., Lin X., Yang J., Zhou T., Yuliang A., Wu Y., Chen Y.R., Cao X., Zemach A., Rustgi S., von Wettstein D., Liu B.
Proc. Natl. Acad. Sci. U.S.A. 2014 111(29) 10642-7
Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.
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Yamauchi T., Johzuka-Hisatomi Y., Terada R., Nakamura I., Iida S.
Plant Mol. Biol. 2014 85(3) 219-32
The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice.
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Abiko M., Maeda H., Tamura K., Hara-Nishimura I., Okamoto T.
J. Exp. Bot. 2013 64(7) 1927-40
Gene expression profiles in rice gametes and zygotes: identification of gamete-enriched genes and up- or down-regulated genes in zygotes after fertilization.
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Sharma R., R K Mohan Singh, Malik G., Deveshwar P., Akhilesh K Tyagi, Kapoor S., Kapoor M.
FEBS J. 2009 276(21) 6301-11
Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress.
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Teerawanichpan P,Krittanai P,Chauvatcharin N,Narangajavana J
Plant Physiol. Biochem. 2009 47 671-80
Purification and characterization of rice DNA methyltransferase.
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Yamauchi,T., Moritoh,S., Johzuka-Hisatomi,Y., Ono,A., Terada,R., Nakamura,I. and Iida,S.
J. Plant Physiol. 2008 165(17) 1774-82
Alternative splicing of the rice OsMET1 genes encoding maintenance DNA methyltransferase
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Pavlopoulou A., Kossida S.
Genomics 2007 90(4) 530-41
Plant cytosine-5 DNA methyltransferases: structure, function, and molecular evolution.
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Teerawanichpan,P., Chandrasekharan,M.B., Jiang,Y., Narangajavana,J. and Hall,T.C.
Planta. 2004 218(3) 337-349
Characterization of two rice DNA methyltransferase genes and RNAi-mediated reactivation of a silenced transgene in rice callus.
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TextPresso Search
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Search textpresso for MET1B
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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genetic imprinting( GO:0006349 )
maintenance of DNA methylation( GO:0010216 )
DNA binding( GO:0003677 )
DNA (cytosine-5-)-methyltransferase activity( GO:0003886 )
protein binding( GO:0005515 )
nucleus( GO:0005634 )
DNA methylation( GO:0006306 )
developmental process( GO:0032502 )
embryonic development( GO:0009790 )
chromatin binding( GO:0003682 )
DNA methylation on cytosine within a CG sequence( GO:0010424 )
embryonic development ending in seed dormancy( GO:0009793 )
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Trait Ontology
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growth and development trait( TO:0000357 )
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Plant Ontology
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Related Strains
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Phenotype images
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Last updated
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Mar 17, 2022
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