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Basic Information
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CGSNL 遺伝子シンボル
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MET1A
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遺伝子シンボルシノニム
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OsMET1a, OsMET1-1, MET1a, MET1-1, OsMET1, OsDMT702, DMT702
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CGSNL 遺伝子名
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METHYLTRANSFERASE 1A
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遺伝子名シノニム
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DNA methyltransferase 1-1, DNA methyltransferase 702
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タンパク質名
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DNA METHYLTRANSFERASE 1A
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対立遺伝子
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osmet1, Osmet1-1, Omet1-2
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染色体番号
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3
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解説
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Alternative splicing. DNA MTase. AF462029. Q7Y1I7. GO:0090116 C-5 methylation of cytosine. OsMET1 in Liu et al. 2019. GO:0071585: detoxification of cadmium ion. GO:0015691: cadmium ion transport. TO:0006059: cadmium content trait.
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形質クラス
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生化学的性質
耐性、抵抗性 - 病気抵抗性
耐性、抵抗性 - ストレス耐性
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発現
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Sequence/Locus
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cDNA Accession No.
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AK108034
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MSU ID
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LOC_Os03g58400.1
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RAP ID
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Os03g0798300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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マップ
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位置情報(cM)
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リンケージマップ
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Classical linkage map
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文献
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Li L., He Y., Zhang X., Zhang H., Sun Z., Li J., Hong G.
Int J Mol Sci 2020 21(16)
Alterations of Rice (<i>Oryza sativa</i> L.) DNA Methylation Patterns Associated with Gene Expression in Response to Rice Black Streaked Dwarf Virus.
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Feng S.J., Liu X.S., Ma L.Y., Khan I.U., Rono J.K., Yang Z.M.
Environ. Pollut. 2020 256 113464
Identification of epigenetic mechanisms in paddy crop associated with lowering environmentally related cadmium risks to food safety.
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Liu X.S., Feng S.J., Zhang B.Q., Wang M.Q., Cao H.W., Rono J.K., Chen X., Yang Z.M.
BMC Plant Biol. 2019 19(1) 283
OsZIP1 functions as a metal efflux transporter limiting excess zinc, copper and cadmium accumulation in rice.
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Wang L., Yuan J., Ma Y., Jiao W., Ye W., Yang D.L., Yi C., Chen Z.J.
Mol Plant 2018 11(2) 300-314
Rice Interploidy Crosses Disrupt Epigenetic Regulation, Gene Expression, and Seed Development.
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Hu L., Li N., Xu C., Zhong S., Lin X., Yang J., Zhou T., Yuliang A., Wu Y., Chen Y.R., Cao X., Zemach A., Rustgi S., von Wettstein D., Liu B.
Proc. Natl. Acad. Sci. U.S.A. 2014 111(29) 10642-7
Mutation of a major CG methylase in rice causes genome-wide hypomethylation, dysregulated genome expression, and seedling lethality.
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Yamauchi T., Johzuka-Hisatomi Y., Terada R., Nakamura I., Iida S.
Plant Mol. Biol. 2014 85(3) 219-32
The MET1b gene encoding a maintenance DNA methyltransferase is indispensable for normal development in rice.
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Sharma R., R K Mohan Singh, Malik G., Deveshwar P., Akhilesh K Tyagi, Kapoor S., Kapoor M.
FEBS J. 2009 276(21) 6301-11
Rice cytosine DNA methyltransferases - gene expression profiling during reproductive development and abiotic stress.
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Yamauchi T,Johzuka-Hisatomi Y,Fukada-Tanaka S,Terada R,Nakamura I,Iida S
Plant J. 2009 60(2) 386-96
Homologous recombination-mediated knock-in targeting of the MET1a gene for a maintenance DNA methyltransferase reproducibly reveals dosage-dependent spatiotemporal gene expression in rice.
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Teerawanichpan P,Krittanai P,Chauvatcharin N,Narangajavana J
Plant Physiol. Biochem. 2009 47 671-80
Purification and characterization of rice DNA methyltransferase.
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Yamauchi,T., Moritoh,S., Johzuka-Hisatomi,Y., Ono,A., Terada,R., Nakamura,I. and Iida,S.
J. Plant Physiol. 2008 165(17) 1774-82
Alternative splicing of the rice OsMET1 genes encoding maintenance DNA methyltransferase
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Pavlopoulou A., Kossida S.
Genomics 2007 90(4) 530-41
Plant cytosine-5 DNA methyltransferases: structure, function, and molecular evolution.
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Teerawanichpan,P., Chandrasekharan,M.B., Jiang,Y., Narangajavana,J. and Hall,T.C.
Planta. 2004 218(3) 337-349
Characterization of two rice DNA methyltransferase genes and RNAi-mediated reactivation of a silenced transgene in rice callus.
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TextPresso Search
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Search textpresso for MET1A
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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オントロジー
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Gene Ontology
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DNA methylation( GO:0006306 )
defense response to virus( GO:0051607 )
DNA binding( GO:0003677 )
gene silencing( GO:0016458 )
maintenance of DNA methylation( GO:0010216 )
nucleus( GO:0005634 )
zygote asymmetric cytokinesis in the embryo sac( GO:0010069 )
negative regulation of flower development( GO:0009910 )
DNA mediated transformation( GO:0009294 )
genetic imprinting( GO:0006349 )
DNA methylation on cytosine within a CG sequence( GO:0010424 )
DNA (cytosine-5-)-methyltransferase activity( GO:0003886 )
response to cadmium ion( GO:0046686 )
protein binding( GO:0005515 )
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Trait Ontology
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abiotic stress trait( TO:0000168 )
black streak dwarf virus resistance( TO:0000020 )
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Plant Ontology
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関連系統
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形質画像
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更新日
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2021-01-10 17:19:07.055
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更新情報
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